Gene Shel_13950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_13950 
Symbol 
ID8395285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1595067 
End bp1597940 
Gene Length2874 bp 
Protein Length957 aa 
Translation table11 
GC content51% 
IMG OID644986149 
Producthypothetical protein 
Protein accessionYP_003143765 
Protein GI257064093 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGG ATATAGTTAA CGTACGCTGC GGCATTGCAG ACAAATCTCA CGAAAACGAG 
TTCTTCCGCT ACTTCGCGAG AGCGGTTAAG GCTTTCTTTG AAAAGAAGGG TATCGACGCT
CTTCTGATCG GCATGCCAAA ATGCCTTGTA AACCAAGACC TTCAAATTGA TGCGCTTCTT
ATCACAGACA GCAAGATGAT AATCATCGAT TTCAAGGACT ACTCTGGCGA ACTAACCCTT
CCCGATGAGC AAGATTTCAG AAGAGGTCGA TGGGAGACGT CGGCGGGAAT CCAGGTAAAG
GGCGGAAGCA GCCCTAATCC CTTCTATCAA ACGGGCTTGC AAAGAGAACG CCTGGCAAGA
ATCCTTGAAA CCTTCTGTCG TAATCTGAGC AAGTTCAATC CCCGGCACAT TACCACCATG
GTGTGTTTCC AGGGGGAGAT GGATGTATTC GGCGTGATAC CAGGGCAATA TAGGCCATGC
TTCTTTATAG CCGACAGAGG TAATTACCTC GAAAAGCTAT ACGACATCGT TTCAGTTGGC
GACGAACCCG CTGGCCTGCT CGGCAGCAAA TTCCTCGATT ACTTCAATGA TCGGGTTTTC
AAGTCTGAAG AATACGACCT GACGATTACT CCCGAATCGC TCGGGGTGCT ACCTAAGCCG
ATTGTCCCTG AAGGAAAATC GTCCATCGAC GAAACAATCA AAGACAGGGT GGCTGAGTTC
TTCGTGAGCG ACATCCCCGT CCTTGCAATT ACTGGAACCG TCGGATCTGG GAAGGCGGCC
ATTTCTTCCG AGATTAGAGA GGCGGCATTA GACGCCGGTT TTTCGTCGGC GAGAGTATTC
GCCCTGTCGA ATAGGGTCAA ACACAACCTG CTCGGAAGCA TCGATGAGGT CGAGAGCCTT
TATTCGGCGA TATTCGATTT CTCGTCGACG AAAGTCGCCG AGGATGGTAG CAAGTTCATT
CCCCTTGCAG AACTCGAAGA ACCAAGGGCT TTTGACGACT TGGATGGCGC AATGCCCGCT
GACGATAAGC CTGCGAAGAC AGCCTTCATC ATCTACGAGA GCCAGATGGT TACAGACTCA
ATGCGCGTGG GCGAAGCCAT TCAATTTGGA TCCGGGAAGC TTCTCAGCGA CCTTCTCGAA
CATCTTGGAA TCGGCGAGGA CAAGCTCGCA GGCAACAAAG TCGTGTTCGT CGGCGACAAG
TTCCAGCTCG GTTTTGGCTC ATGGAGCGAA TCGTGTCTCA ACCCTGAGTA CTATCGTGGC
CGAATCAGCA TGACATCGAT AGAATTGCCG GACACTCAAA CTCCAACGGG AATCCAGCAA
GTCTGCCTTG ATATAGCAAA CGCAATCAGG ATCGGACGCC TTTCCCATCT CGTGTTAACC
GCCAATGATC AGCTCGCCAT TTGCGGACAG AACGACGAAG CTAAGCTCTT GAGGGAAGCT
GAGAGCGACT GGCGCTCACA CAAGGTTCTC TCGTACACCA ACAGCCAGTC ATGCGGTCTT
AATGGATACA TCAAGAGGCG AATCAGGCAA AACGGCCCTC GCTGTTCAAT TGGAGACATA
ATCATCTTCG AGAACGAGGT TCTAGCTTAC CCTTCGTCGT CGAGCGCCTC TTCCGAGGAA
GGGTCTGTCT TCCAATTCGG ATCGCCTGAA CCAACGAGAA TTCCCAACGG CACATTTGGA
ACCATCGTCG GACTTGGAAA CGAGACATCA ATTGATGTGG ACATCAATGG TAGCGATGCT
CCGATTAGGC TTACGCTGGT CGAGGCTGAT GTACGGTTAA ACGTTGACGG CTTCGACGAA
ACGCTCGAGA TACGCTTCAT CAAGGAACTC CTCGAATCGG AAGACTCAAA GCTGAGCACG
ATGGAGGACA TTGCCCTGCG AATACATGTA GAAAAGCTCT TCAGAGAGGC TTTGGCGAGG
AATCCTTTCG AAAAGAGCAG CTACTACAAA GAGATGATCG ATAATGGCGA CTTCGTCGAA
ACCAAAGAGG GCGTCTACCG GGACCCGAAA GACAAGAGGA GGCGAACCTC GTATGAGGAG
AAGCACCGCC GAGAGGTTCA GAAGAAGAGC CTGACACGGG GAACGGAATA CTATCTGTGG
TCCAATGCGG CGCAAGTCAA ATACGGATGG TGCATGACCG TCCATAAGGC TATGTCGTAC
AAATGGAACA CCGTGACCTT CTCAACCAGG ATAGATGGAG GAAGGCGCAA CGAAAACTAT
TTCCGCTTCC TTTACACCGG AATCAGTCGT GCCGAGGAAC ATGTCAACCT TGTCCGTTGG
GAGCCCGTGT CGCCGTTTGA GAAGACGGAA TTTGGCACGA GCGGCCAAGG TGCTCCTTCG
GCGTGCAACG ATGTGATCTT CCGAGCAACC GGAGACGATA TTGCCTCGGA GATACTTGCG
GCCGTGGGAA CCCTTGAACC GGATGGGTTC AAGGTGTCTT CGAGCAAGCT GGCACAATAC
CAGGTGATTT GCGAAATCGA AAAAGACACG ACTACAGCTA AAGTTATCTT CTACTACAAC
AAGAAAGGTG AGGTCACAAG ACTGACTCTG TCCACGGGCG ACAAGGAATT GTTCGCCGAT
TTCAGGGCTG CATTCGGAAA CGGCCAGGAC GACCAAAGCC AAGCTAGTAC CACCCCGATG
AAATGGTTGT ATGACCACCT GAATGAAGGC GCACTTGCTG ATTCGGTGCT CGAAATCGAG
GAGTCATCAA ACTATCTGGA CATCCTGAAG GCATGCCAAG ACAGCGAGAG CGTCATCATC
CGCGCAAACT ATAGAAAAGA CCAGACGGTG AGCAATTTCA AATACCTGTC TGGAAGCATG
ACCCTGTACG AACACATCGT CTCTGCGATA AAGACGTATT ACGCACTCGA CTAG
 
Protein sequence
MSEDIVNVRC GIADKSHENE FFRYFARAVK AFFEKKGIDA LLIGMPKCLV NQDLQIDALL 
ITDSKMIIID FKDYSGELTL PDEQDFRRGR WETSAGIQVK GGSSPNPFYQ TGLQRERLAR
ILETFCRNLS KFNPRHITTM VCFQGEMDVF GVIPGQYRPC FFIADRGNYL EKLYDIVSVG
DEPAGLLGSK FLDYFNDRVF KSEEYDLTIT PESLGVLPKP IVPEGKSSID ETIKDRVAEF
FVSDIPVLAI TGTVGSGKAA ISSEIREAAL DAGFSSARVF ALSNRVKHNL LGSIDEVESL
YSAIFDFSST KVAEDGSKFI PLAELEEPRA FDDLDGAMPA DDKPAKTAFI IYESQMVTDS
MRVGEAIQFG SGKLLSDLLE HLGIGEDKLA GNKVVFVGDK FQLGFGSWSE SCLNPEYYRG
RISMTSIELP DTQTPTGIQQ VCLDIANAIR IGRLSHLVLT ANDQLAICGQ NDEAKLLREA
ESDWRSHKVL SYTNSQSCGL NGYIKRRIRQ NGPRCSIGDI IIFENEVLAY PSSSSASSEE
GSVFQFGSPE PTRIPNGTFG TIVGLGNETS IDVDINGSDA PIRLTLVEAD VRLNVDGFDE
TLEIRFIKEL LESEDSKLST MEDIALRIHV EKLFREALAR NPFEKSSYYK EMIDNGDFVE
TKEGVYRDPK DKRRRTSYEE KHRREVQKKS LTRGTEYYLW SNAAQVKYGW CMTVHKAMSY
KWNTVTFSTR IDGGRRNENY FRFLYTGISR AEEHVNLVRW EPVSPFEKTE FGTSGQGAPS
ACNDVIFRAT GDDIASEILA AVGTLEPDGF KVSSSKLAQY QVICEIEKDT TTAKVIFYYN
KKGEVTRLTL STGDKELFAD FRAAFGNGQD DQSQASTTPM KWLYDHLNEG ALADSVLEIE
ESSNYLDILK ACQDSESVII RANYRKDQTV SNFKYLSGSM TLYEHIVSAI KTYYALD