Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_13950 |
Symbol | |
ID | 8395285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 1595067 |
End bp | 1597940 |
Gene Length | 2874 bp |
Protein Length | 957 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644986149 |
Product | hypothetical protein |
Protein accession | YP_003143765 |
Protein GI | 257064093 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAGG ATATAGTTAA CGTACGCTGC GGCATTGCAG ACAAATCTCA CGAAAACGAG TTCTTCCGCT ACTTCGCGAG AGCGGTTAAG GCTTTCTTTG AAAAGAAGGG TATCGACGCT CTTCTGATCG GCATGCCAAA ATGCCTTGTA AACCAAGACC TTCAAATTGA TGCGCTTCTT ATCACAGACA GCAAGATGAT AATCATCGAT TTCAAGGACT ACTCTGGCGA ACTAACCCTT CCCGATGAGC AAGATTTCAG AAGAGGTCGA TGGGAGACGT CGGCGGGAAT CCAGGTAAAG GGCGGAAGCA GCCCTAATCC CTTCTATCAA ACGGGCTTGC AAAGAGAACG CCTGGCAAGA ATCCTTGAAA CCTTCTGTCG TAATCTGAGC AAGTTCAATC CCCGGCACAT TACCACCATG GTGTGTTTCC AGGGGGAGAT GGATGTATTC GGCGTGATAC CAGGGCAATA TAGGCCATGC TTCTTTATAG CCGACAGAGG TAATTACCTC GAAAAGCTAT ACGACATCGT TTCAGTTGGC GACGAACCCG CTGGCCTGCT CGGCAGCAAA TTCCTCGATT ACTTCAATGA TCGGGTTTTC AAGTCTGAAG AATACGACCT GACGATTACT CCCGAATCGC TCGGGGTGCT ACCTAAGCCG ATTGTCCCTG AAGGAAAATC GTCCATCGAC GAAACAATCA AAGACAGGGT GGCTGAGTTC TTCGTGAGCG ACATCCCCGT CCTTGCAATT ACTGGAACCG TCGGATCTGG GAAGGCGGCC ATTTCTTCCG AGATTAGAGA GGCGGCATTA GACGCCGGTT TTTCGTCGGC GAGAGTATTC GCCCTGTCGA ATAGGGTCAA ACACAACCTG CTCGGAAGCA TCGATGAGGT CGAGAGCCTT TATTCGGCGA TATTCGATTT CTCGTCGACG AAAGTCGCCG AGGATGGTAG CAAGTTCATT CCCCTTGCAG AACTCGAAGA ACCAAGGGCT TTTGACGACT TGGATGGCGC AATGCCCGCT GACGATAAGC CTGCGAAGAC AGCCTTCATC ATCTACGAGA GCCAGATGGT TACAGACTCA ATGCGCGTGG GCGAAGCCAT TCAATTTGGA TCCGGGAAGC TTCTCAGCGA CCTTCTCGAA CATCTTGGAA TCGGCGAGGA CAAGCTCGCA GGCAACAAAG TCGTGTTCGT CGGCGACAAG TTCCAGCTCG GTTTTGGCTC ATGGAGCGAA TCGTGTCTCA ACCCTGAGTA CTATCGTGGC CGAATCAGCA TGACATCGAT AGAATTGCCG GACACTCAAA CTCCAACGGG AATCCAGCAA GTCTGCCTTG ATATAGCAAA CGCAATCAGG ATCGGACGCC TTTCCCATCT CGTGTTAACC GCCAATGATC AGCTCGCCAT TTGCGGACAG AACGACGAAG CTAAGCTCTT GAGGGAAGCT GAGAGCGACT GGCGCTCACA CAAGGTTCTC TCGTACACCA ACAGCCAGTC ATGCGGTCTT AATGGATACA TCAAGAGGCG AATCAGGCAA AACGGCCCTC GCTGTTCAAT TGGAGACATA ATCATCTTCG AGAACGAGGT TCTAGCTTAC CCTTCGTCGT CGAGCGCCTC TTCCGAGGAA GGGTCTGTCT TCCAATTCGG ATCGCCTGAA CCAACGAGAA TTCCCAACGG CACATTTGGA ACCATCGTCG GACTTGGAAA CGAGACATCA ATTGATGTGG ACATCAATGG TAGCGATGCT CCGATTAGGC TTACGCTGGT CGAGGCTGAT GTACGGTTAA ACGTTGACGG CTTCGACGAA ACGCTCGAGA TACGCTTCAT CAAGGAACTC CTCGAATCGG AAGACTCAAA GCTGAGCACG ATGGAGGACA TTGCCCTGCG AATACATGTA GAAAAGCTCT TCAGAGAGGC TTTGGCGAGG AATCCTTTCG AAAAGAGCAG CTACTACAAA GAGATGATCG ATAATGGCGA CTTCGTCGAA ACCAAAGAGG GCGTCTACCG GGACCCGAAA GACAAGAGGA GGCGAACCTC GTATGAGGAG AAGCACCGCC GAGAGGTTCA GAAGAAGAGC CTGACACGGG GAACGGAATA CTATCTGTGG TCCAATGCGG CGCAAGTCAA ATACGGATGG TGCATGACCG TCCATAAGGC TATGTCGTAC AAATGGAACA CCGTGACCTT CTCAACCAGG ATAGATGGAG GAAGGCGCAA CGAAAACTAT TTCCGCTTCC TTTACACCGG AATCAGTCGT GCCGAGGAAC ATGTCAACCT TGTCCGTTGG GAGCCCGTGT CGCCGTTTGA GAAGACGGAA TTTGGCACGA GCGGCCAAGG TGCTCCTTCG GCGTGCAACG ATGTGATCTT CCGAGCAACC GGAGACGATA TTGCCTCGGA GATACTTGCG GCCGTGGGAA CCCTTGAACC GGATGGGTTC AAGGTGTCTT CGAGCAAGCT GGCACAATAC CAGGTGATTT GCGAAATCGA AAAAGACACG ACTACAGCTA AAGTTATCTT CTACTACAAC AAGAAAGGTG AGGTCACAAG ACTGACTCTG TCCACGGGCG ACAAGGAATT GTTCGCCGAT TTCAGGGCTG CATTCGGAAA CGGCCAGGAC GACCAAAGCC AAGCTAGTAC CACCCCGATG AAATGGTTGT ATGACCACCT GAATGAAGGC GCACTTGCTG ATTCGGTGCT CGAAATCGAG GAGTCATCAA ACTATCTGGA CATCCTGAAG GCATGCCAAG ACAGCGAGAG CGTCATCATC CGCGCAAACT ATAGAAAAGA CCAGACGGTG AGCAATTTCA AATACCTGTC TGGAAGCATG ACCCTGTACG AACACATCGT CTCTGCGATA AAGACGTATT ACGCACTCGA CTAG
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Protein sequence | MSEDIVNVRC GIADKSHENE FFRYFARAVK AFFEKKGIDA LLIGMPKCLV NQDLQIDALL ITDSKMIIID FKDYSGELTL PDEQDFRRGR WETSAGIQVK GGSSPNPFYQ TGLQRERLAR ILETFCRNLS KFNPRHITTM VCFQGEMDVF GVIPGQYRPC FFIADRGNYL EKLYDIVSVG DEPAGLLGSK FLDYFNDRVF KSEEYDLTIT PESLGVLPKP IVPEGKSSID ETIKDRVAEF FVSDIPVLAI TGTVGSGKAA ISSEIREAAL DAGFSSARVF ALSNRVKHNL LGSIDEVESL YSAIFDFSST KVAEDGSKFI PLAELEEPRA FDDLDGAMPA DDKPAKTAFI IYESQMVTDS MRVGEAIQFG SGKLLSDLLE HLGIGEDKLA GNKVVFVGDK FQLGFGSWSE SCLNPEYYRG RISMTSIELP DTQTPTGIQQ VCLDIANAIR IGRLSHLVLT ANDQLAICGQ NDEAKLLREA ESDWRSHKVL SYTNSQSCGL NGYIKRRIRQ NGPRCSIGDI IIFENEVLAY PSSSSASSEE GSVFQFGSPE PTRIPNGTFG TIVGLGNETS IDVDINGSDA PIRLTLVEAD VRLNVDGFDE TLEIRFIKEL LESEDSKLST MEDIALRIHV EKLFREALAR NPFEKSSYYK EMIDNGDFVE TKEGVYRDPK DKRRRTSYEE KHRREVQKKS LTRGTEYYLW SNAAQVKYGW CMTVHKAMSY KWNTVTFSTR IDGGRRNENY FRFLYTGISR AEEHVNLVRW EPVSPFEKTE FGTSGQGAPS ACNDVIFRAT GDDIASEILA AVGTLEPDGF KVSSSKLAQY QVICEIEKDT TTAKVIFYYN KKGEVTRLTL STGDKELFAD FRAAFGNGQD DQSQASTTPM KWLYDHLNEG ALADSVLEIE ESSNYLDILK ACQDSESVII RANYRKDQTV SNFKYLSGSM TLYEHIVSAI KTYYALD
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