Gene Shel_13900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_13900 
Symbol 
ID8395280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1590340 
End bp1590885 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content60% 
IMG OID644986144 
Producthypothetical protein 
Protein accessionYP_003143760 
Protein GI257064088 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGCG CCACAAAATA CTGCCCCGAG TGCGGTCGCG AACTGCCTGC CGAAGCTCGT 
TTCTGCACGG GTTGCGGCAC CGGTTTCACG ACCGTTGCAG AAACGCCGGA GCCTATCGTC
GCGCCGGCTT CTGAACAGCA GGCTGCGCAA AACACAAGTC CGGAAGTAAC CGCGTTGAGC
ATCGAGCTTC AGCGGTTGAG CGACCTGTTG GAAAGCGGTT CGATAACGCA GGAGACGTAC
GAATCGAGCA AGGCGCAGGC GCTCGCAACC TTCGCAAACG CGCGGCAGCA GGCCAATGCG
TCCGCTGCGG TTCAGCAGGC TGCAGCTGCT CCCGATACGG GCGGATTCGG ATGGGCGGCC
CTCGGATTCT TCTTCCCGAT GGTGGGTCTG ATTCTGTACC TGGTATGGAA GGACGACCGC
CCGATAACGG CGAAAGCTGC AGGCAAAGGT GCGCTTATCG GCGTCATCGT GTCTGTCGTG
CTATCGGTGC TTCTCGGCAT CCTTTCGGCC GTGCTGCCGC TCATCATTAT GAACTCTTAC
TATTAG
 
Protein sequence
MTSATKYCPE CGRELPAEAR FCTGCGTGFT TVAETPEPIV APASEQQAAQ NTSPEVTALS 
IELQRLSDLL ESGSITQETY ESSKAQALAT FANARQQANA SAAVQQAAAA PDTGGFGWAA
LGFFFPMVGL ILYLVWKDDR PITAKAAGKG ALIGVIVSVV LSVLLGILSA VLPLIIMNSY
Y