Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_13880 |
Symbol | |
ID | 8395278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1588165 |
End bp | 1589481 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644986142 |
Product | hypothetical protein |
Protein accession | YP_003143758 |
Protein GI | 257064086 |
COG category | [S] Function unknown |
COG ID | [COG3177] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAACAAT CCGTTCAGTT GCTAGATACG CCGCAGTTCA AAGAGCTCGT TCGCGCTGCA TGGCTGGCCC CCGTCCGACG CTCTGACATC GTGCCGGAAT ATGTTCCAGG CGGTTTTTCT GCAGACCAGG TATGGGATGC CCTCACTGCG ATCCGATACG CCCAATCCTA CAGAAGCCCG GTTTCGCTCG CCGGCGCCAG TCACTCTTCG GGCAATTGGC ACAACTTCAC CGTGCGGCTC CAGGACACCT GCAGGCAGAT TGCAGATCTT ACGTACAAGG GGTCCGACCT GGACATCATC GCCCGAGACA GGGCGGGTAC CGCATTCATC ACGCAGCAAT ACATCGAGGA GATGGTGACA AACCTCGACT TCGACGGCTT CACGGCGAAT TACGAAGACG TCCGAGCCGT ATTGGTCGGC GACCGCCCGC CGGTCGATGC CGCGGAAACG ATTGCGGCCA ATTACCACTC GCTCATGGTT GAGCTTGGTG ACATGGTTGA TAGCCCGTTC GATGAGCAAA CGCTGGGCGA CATGTACGCC CGTCTTGCGC ATGGCATCGA AGACGAGGTT CGCCGCATCG AACAAGCCGA CATCTCAACG GGCTGCAAGG TGCCCCGATC TCCGCTCCAG GACCACTACC GCGCAGCAGG CTCCGCACCC GAATCGTCGA TCGCGCTGCC CATCGACATC GCCAACGGAC GCGCCGAAGC ACCCAGACGC CACCCGATTA TGGAATCGAT GCTCGTCAAC TGCCAGTTTT GGCGCACGAA CCTGTATCCG GCGCTCAACA ACCTCATGGG CTGCATTGCA AGCAGGTTCT ATCTGGTACG TGAAGGCTAC CCCGTCATGC GCTACGTGCC GAAGATTCGC ATTCTCGAAA AATGGCGCTA CGGGGCGTAT GACGGCATTG CATCGTTTTC GTTCGACGAA GCCATGGCAA TCGCGCACGA AAACGGCGAC TGGACGGCAT ACTACGATGC AGTCATGTCG CTTCTGCTGC TTGAGATACA GGACATGAAG CGATCGCTGC TGCACCGCGC CGCCATCGAC GAGCGTGCGA TGTCCGGCAT CGGCAACATT CCGTATCTGA CCCACCGCCA GCGGGATGTG TTGAAGCAAG CTGTTCTTGC TCCCGAAACC GAATTCGCCA TAGCCGCGCA TCAGAAGACG TACGGCATCG CCTATTCGAC AGCCCGAGCC GACCTGGAGA AACTTGCAGA TGCGGGATAT CTCACGCGTT TCATGTCCGG TAGTGCATAC CACTACCGCG CTGCTGCAAA TCTGCGTACG ACGCTGGCAG CGAAATGCCC GGCGTAA
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Protein sequence | MKQSVQLLDT PQFKELVRAA WLAPVRRSDI VPEYVPGGFS ADQVWDALTA IRYAQSYRSP VSLAGASHSS GNWHNFTVRL QDTCRQIADL TYKGSDLDII ARDRAGTAFI TQQYIEEMVT NLDFDGFTAN YEDVRAVLVG DRPPVDAAET IAANYHSLMV ELGDMVDSPF DEQTLGDMYA RLAHGIEDEV RRIEQADIST GCKVPRSPLQ DHYRAAGSAP ESSIALPIDI ANGRAEAPRR HPIMESMLVN CQFWRTNLYP ALNNLMGCIA SRFYLVREGY PVMRYVPKIR ILEKWRYGAY DGIASFSFDE AMAIAHENGD WTAYYDAVMS LLLLEIQDMK RSLLHRAAID ERAMSGIGNI PYLTHRQRDV LKQAVLAPET EFAIAAHQKT YGIAYSTARA DLEKLADAGY LTRFMSGSAY HYRAAANLRT TLAAKCPA
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