Gene Shel_13880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_13880 
Symbol 
ID8395278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1588165 
End bp1589481 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content59% 
IMG OID644986142 
Producthypothetical protein 
Protein accessionYP_003143758 
Protein GI257064086 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACAAT CCGTTCAGTT GCTAGATACG CCGCAGTTCA AAGAGCTCGT TCGCGCTGCA 
TGGCTGGCCC CCGTCCGACG CTCTGACATC GTGCCGGAAT ATGTTCCAGG CGGTTTTTCT
GCAGACCAGG TATGGGATGC CCTCACTGCG ATCCGATACG CCCAATCCTA CAGAAGCCCG
GTTTCGCTCG CCGGCGCCAG TCACTCTTCG GGCAATTGGC ACAACTTCAC CGTGCGGCTC
CAGGACACCT GCAGGCAGAT TGCAGATCTT ACGTACAAGG GGTCCGACCT GGACATCATC
GCCCGAGACA GGGCGGGTAC CGCATTCATC ACGCAGCAAT ACATCGAGGA GATGGTGACA
AACCTCGACT TCGACGGCTT CACGGCGAAT TACGAAGACG TCCGAGCCGT ATTGGTCGGC
GACCGCCCGC CGGTCGATGC CGCGGAAACG ATTGCGGCCA ATTACCACTC GCTCATGGTT
GAGCTTGGTG ACATGGTTGA TAGCCCGTTC GATGAGCAAA CGCTGGGCGA CATGTACGCC
CGTCTTGCGC ATGGCATCGA AGACGAGGTT CGCCGCATCG AACAAGCCGA CATCTCAACG
GGCTGCAAGG TGCCCCGATC TCCGCTCCAG GACCACTACC GCGCAGCAGG CTCCGCACCC
GAATCGTCGA TCGCGCTGCC CATCGACATC GCCAACGGAC GCGCCGAAGC ACCCAGACGC
CACCCGATTA TGGAATCGAT GCTCGTCAAC TGCCAGTTTT GGCGCACGAA CCTGTATCCG
GCGCTCAACA ACCTCATGGG CTGCATTGCA AGCAGGTTCT ATCTGGTACG TGAAGGCTAC
CCCGTCATGC GCTACGTGCC GAAGATTCGC ATTCTCGAAA AATGGCGCTA CGGGGCGTAT
GACGGCATTG CATCGTTTTC GTTCGACGAA GCCATGGCAA TCGCGCACGA AAACGGCGAC
TGGACGGCAT ACTACGATGC AGTCATGTCG CTTCTGCTGC TTGAGATACA GGACATGAAG
CGATCGCTGC TGCACCGCGC CGCCATCGAC GAGCGTGCGA TGTCCGGCAT CGGCAACATT
CCGTATCTGA CCCACCGCCA GCGGGATGTG TTGAAGCAAG CTGTTCTTGC TCCCGAAACC
GAATTCGCCA TAGCCGCGCA TCAGAAGACG TACGGCATCG CCTATTCGAC AGCCCGAGCC
GACCTGGAGA AACTTGCAGA TGCGGGATAT CTCACGCGTT TCATGTCCGG TAGTGCATAC
CACTACCGCG CTGCTGCAAA TCTGCGTACG ACGCTGGCAG CGAAATGCCC GGCGTAA
 
Protein sequence
MKQSVQLLDT PQFKELVRAA WLAPVRRSDI VPEYVPGGFS ADQVWDALTA IRYAQSYRSP 
VSLAGASHSS GNWHNFTVRL QDTCRQIADL TYKGSDLDII ARDRAGTAFI TQQYIEEMVT
NLDFDGFTAN YEDVRAVLVG DRPPVDAAET IAANYHSLMV ELGDMVDSPF DEQTLGDMYA
RLAHGIEDEV RRIEQADIST GCKVPRSPLQ DHYRAAGSAP ESSIALPIDI ANGRAEAPRR
HPIMESMLVN CQFWRTNLYP ALNNLMGCIA SRFYLVREGY PVMRYVPKIR ILEKWRYGAY
DGIASFSFDE AMAIAHENGD WTAYYDAVMS LLLLEIQDMK RSLLHRAAID ERAMSGIGNI
PYLTHRQRDV LKQAVLAPET EFAIAAHQKT YGIAYSTARA DLEKLADAGY LTRFMSGSAY
HYRAAANLRT TLAAKCPA