| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_13830 |
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| Symbol | |
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| ID | 8395273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 1581676 |
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| End bp | 1583370 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644986137 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_003143753 |
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| Protein GI | 257064081 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCCA TTACCATGCC GGCGTTGCCA GGGAACAAAC CTAACATCGT TGCGAGCGTC
CTGGTGAAAA CGGGAGACGC CGTTGCAGAA GGGCAGGAGC TCTTCAACGT TGAGACGAGC
AAGCGAGCCG TGCCTATAAA GGCTCCCGCC GATGGCGTGG TTTCGCGGGT GCTGGTGTGC
GAAGGTGATG AAGTTGCCGC AGGAGATGTG TTGGCACATC TTGATGAAGC CGAGTCCGTT
GCCCAGACGC TGGCGCCCTC TTCTGAAACG GCGCCGGAAG AACATCGGAA AGAAGCGGAC
GACGACCATG CTGAGCTGCT GATCATCGGC GGCGGCACCG GCGGATACGT TGCGGCCCTG
TATGCTTCGA AAATGGGGAA GCACGTGACG CTTGTCGAGC AGGACAAGCT TGGCGGAACC
TGCCTGAACA GGGGATGCAT TCCCACGAAG ACGCTTATAT CATCTGCGGA CCTGTACAGC
AGGGTCCTTC GTGCGGACGA ATGGGGCATC GAAGTTTCGG GGCATGTGCG GCCCAACATG
GAAGCCATCA TCGACCGCAA GAGCAGCGTT GTGGATGAGC TGGTAGGCGG CATCGAGTAC
CTCATGGACG AAAACCGCAT TCGCGTGATC AACGGCACAG CGCGGTTCGA AGGCAACGGC
GAAGTTTCCG TCGAATGCGG CTGCGACGTG CTGAAACTCA CTTTTGACGA CTGCATCGTC
GCTACGGGTT CGTGCATTCG CCCGGTTTCG CTGCCAGGCA CCGACTTGCC CAAGGTCCAT
ACCACCGACG AGGCTCTGGA CTGTAAAGAG CTTCCCGAAT CTGTTGTCAT AGTGGGTGGC
GGGGTAACCG GTATGGAGTT TGCCTTCCTG TACGCGAACC TTGGGGTGGA TGTGACCGTC
CTGGCACGAC GCCCCCGCAT TCTGCACATG TTCGATCAGG AAGCTTCGGC AGAAATAACA
CGCGCCGCAG AAAACCGAGG GATCCGCATC ATACCGAATG CCGATGTGAA GTGCTTCAGC
ATGATGCAGA ACGGAAGCGT CCGCACCGTG TACGAGGTCG ACGGCGAATT GCACTTTGTG
GACAACGGCT ACGTGCTTTT GGCTGGCGGG CGGGTGCCCA ACACCGATGA CATGCGAATC
CAGAACACCG ATGTGGAGCT GGACGCTTCG ACCGGTGCCA TCCTGGTGGA TGGGCGCATG
AGGACGAACG TCGCTCATGT GTATGCCATC GGCGATGTGA ACGGGCTTGC TATGCTTGCT
CACGCCGCGT CATACCAAGG ACGCATCGCG GTTGATGACA TCCTGGGCAA TTCGGTCTCG
TTCCGCCCTG AAATCATACC CAGCGTTGCC TACACCGACC CCGAAGTAGC TGCCGTAGGG
CTTTCTGCCG ACGATGCCAG GAAAGACCCA TCCCGCTACA GGGTTGGGAC GTTCTCATTC
GCGCACAACG GCAAGGCGCT CGCCGAAAAC TCAGGTCAGG GCTATGTGGC GTTGGTGAGC
GACGCGGACG ACGTCTTGAA AGGCGCCACT ATCGTCGGAG GACATGCATC CGCCCTCATC
GGATACATCG GGCTTGCAAT ATCGGCAGGT CTTTCCGGCG AGCAGGTTCG CGAAGCAGTA
TTCGCACATC CGACCACGTC GGAGGCCATC TACGAGGCGG CGTGCGACCT GACTTTCGGG
GCGCTGCACG AGTAG
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| Protein sequence | MIAITMPALP GNKPNIVASV LVKTGDAVAE GQELFNVETS KRAVPIKAPA DGVVSRVLVC
EGDEVAAGDV LAHLDEAESV AQTLAPSSET APEEHRKEAD DDHAELLIIG GGTGGYVAAL
YASKMGKHVT LVEQDKLGGT CLNRGCIPTK TLISSADLYS RVLRADEWGI EVSGHVRPNM
EAIIDRKSSV VDELVGGIEY LMDENRIRVI NGTARFEGNG EVSVECGCDV LKLTFDDCIV
ATGSCIRPVS LPGTDLPKVH TTDEALDCKE LPESVVIVGG GVTGMEFAFL YANLGVDVTV
LARRPRILHM FDQEASAEIT RAAENRGIRI IPNADVKCFS MMQNGSVRTV YEVDGELHFV
DNGYVLLAGG RVPNTDDMRI QNTDVELDAS TGAILVDGRM RTNVAHVYAI GDVNGLAMLA
HAASYQGRIA VDDILGNSVS FRPEIIPSVA YTDPEVAAVG LSADDARKDP SRYRVGTFSF
AHNGKALAEN SGQGYVALVS DADDVLKGAT IVGGHASALI GYIGLAISAG LSGEQVREAV
FAHPTTSEAI YEAACDLTFG ALHE
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