| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_13800 |
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| Symbol | |
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| ID | 8395270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 1578015 |
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| End bp | 1579658 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644986134 |
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| Product | succinate dehydrogenase/fumarate reductase flavoprotein subunit |
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| Protein accession | YP_003143750 |
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| Protein GI | 257064078 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.290223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAAT CTGGAATCAC CCGTCGTAAC TTCCTTACCG GTGCGAGCGT GGCCGCAGCA
GGTGCCGCCG CCGTCTCGAT GCTCGGCTGC TCGTCCGGTA CGCCGGCCGC CAGCGAAGAA
ACCGCTGCTG CTGAGGGAAG CACTGCGACG AACCCCACGG CCGTCGACGA TTCCGTCTGG
GCGCTCGAAG TGGTGGGCGA GCCCACCGAG ACCATCGATT GCGACGTCTG CGTCATCGGC
GGAGGCGGCA CCGGCATGGC CGCAACCATC CAGGCCACCG AGCAGGGCCT CAATGTTGTC
CTGCTTGAGA AGGCAGGAGC TCTGGGCGGC GCATTCTCCG CTACAGAAGG CATGTTCGGC
GTCGGTTCTC ACTGGCAGGA AGAAGCCGGC GAACACGGCA CCGTGGGCGA GGCCGTCCGC
CGTTGCGTGA ACTATCACCA CTACATCCCC TCGACGGAGC TGTACTACAA CTTCTTCAAC
CAGACCGCCG AGACCATCGA CTGGCTGGAA GAGCACGACT GCACGTTCCG CGCAGTCGTC
GATTACGGTG GAAACTTGGC TTGGCATGTC TACTACTATG ACGAGAACGC CTCCAGCCCC
GGCGCATACT TCACGGATAG CCTGCGTGTT GCCACCGAAG CCACCAACGC CAATATTCTG
CTGAACACCG GCGCTAAGAA GATCCTGGTG GACAACGGCG CTGTGACCGG CGTTATCGCT
GCCGACTCCG ACGGCAAGGT CATCCAGGTC AACGCCCCGG TCGTCATGCT TGCTTCCGGC
GGCTATTCCA GCAACATGGA GTTCCTGCAT GCCGTTTCGC CGTACACGGT GAACAAGAAC
CTGGTGTCCC TGGGCGCTCC CGGCCGCGAC GGCGACGGCA TCAAGATGGG CGTTGACGCA
GGCGTCGCCC TGTCCGAGGG CTACGGCACC GTCATGTGGT GCGGACCTGC CGCCATCGGC
GCTCAGTGGG CCACCGATGC CTATTCCGCA TCCGTCCAGC CCACCCTGTG GGTCAACCAG
AACGCCAAGC GTTTCATCGC CGAGGATCTG TGGATCGGCA ACTTCGCCGC GGGCGGCATC
GCCTGCCGTG ACCAGGAGCT GACCTACGTC ATCTTCCGTG AGCAGGACCT GGCCGCTTGG
GAGGCCAACG GACCGTACGG TACCGTCTTC ACCTTCGGCA CCCCGGGCGT TCCCATGGAC
GAGGCTCGCA GCCAGCTTGA ATCCCTCGGC TCGGTGCATG TTGCCGACAC CGTTGAGGAA
CTGGCCGAAT CCGTCGGTCT GGATCCCGCT GCCCTGAAGG CCACCGTTGA CGAGTACAAC
GGCTTCTGCG AAGCGGGTGA GGACCCGATC TTCGGCAAGG CAGCCGAGTA TCTGACCCCG
ATTGACGAGG GCCCGTTCTG GATTCTTGAA GTTGCCGACG GCTACTACAC CACCGTGGGC
GGCCTGGAGA TCAACGAGAA GCTGGAAGCC ATCGACAACG AGCATATGCC CATCAAGGGT
CTCTACGTCG GCGGATGCGA CACCGGCAGC CTCTACGGCG ACTCCTATGA CGTGGCCACC
GCACCTGGCA GCCAGGCATC CTGGGCCATC AACTCCGGCC GTCTGGCCAT GAAGAACGCT
GGAGAATATC TCGCCAGCTT GTAA
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| Protein sequence | MIKSGITRRN FLTGASVAAA GAAAVSMLGC SSGTPAASEE TAAAEGSTAT NPTAVDDSVW
ALEVVGEPTE TIDCDVCVIG GGGTGMAATI QATEQGLNVV LLEKAGALGG AFSATEGMFG
VGSHWQEEAG EHGTVGEAVR RCVNYHHYIP STELYYNFFN QTAETIDWLE EHDCTFRAVV
DYGGNLAWHV YYYDENASSP GAYFTDSLRV ATEATNANIL LNTGAKKILV DNGAVTGVIA
ADSDGKVIQV NAPVVMLASG GYSSNMEFLH AVSPYTVNKN LVSLGAPGRD GDGIKMGVDA
GVALSEGYGT VMWCGPAAIG AQWATDAYSA SVQPTLWVNQ NAKRFIAEDL WIGNFAAGGI
ACRDQELTYV IFREQDLAAW EANGPYGTVF TFGTPGVPMD EARSQLESLG SVHVADTVEE
LAESVGLDPA ALKATVDEYN GFCEAGEDPI FGKAAEYLTP IDEGPFWILE VADGYYTTVG
GLEINEKLEA IDNEHMPIKG LYVGGCDTGS LYGDSYDVAT APGSQASWAI NSGRLAMKNA
GEYLASL
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