Gene Shel_13780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_13780 
Symbol 
ID8395268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1575732 
End bp1576814 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content58% 
IMG OID644986132 
ProductNa+/H+ antiporter NhaD-like permease 
Protein accessionYP_003143748 
Protein GI257064076 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1055] Na+/H+ antiporter NhaD and related arsenite permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCTGCA TCGCCTTTAT ATGCGCATGT ATTTCCATGG CGCTCACAGG AGACGTCGAG 
GCCGCCCCTT CCTATATAGA CTGGCGGGTC ATTATTCTGC TGTTCTGCCT GATGGCGGCT
GTGGCCGGCC TACGTGAAAG CGGCGTTTTA GCAAGAATCG CACAGACGCT CGTCTCGGGC
AGACGGACGA AGCGGGTCGT GTGCTTGGCC TTGGTCATGC TCCCCTTCGT CACGTCTATG
CTCATCACCA ACGATGTTGC ATTGCTCACG TTCGTGCCCA TTGCGATTCT CGCCCTTGAG
ACCGCCGGTT GGCAAGACGG CTTGGTGCGC GTGATCGTCC TGCAGGCAAT CGCAGCTAAC
CTTGGCGGCA TGGTCACGCC TGTGGGAAAC CCTCAGAACC TGTTCATCTT CACGACATAC
GATCTTACGC TGGCTGACTT CTTCATGACG CTTGCTCCCT TCGGAGCCTT GGCCTTCGTT
CTGATAGCAG CCGCATGCCT GGCATTCGGC CCTACGAAGG CCGATGTCGA ACTCGCCGTC
GACAAACACT CCGTCCAATA CCGCAGATTC GCGCTGCATG CGTGCCTGTT CGCGATAAGC
CTGCTGGCGG TTTTCCACGT GTTCGACCAT TTGGTCCTAC TGACTGCGGT CGTAGCGGCG
CTCTTTCTGT TCGACAGGAG AATATTCCTC GAGGTCGACT ACGCGTTGCT CGTCACGTTC
GTGTGCTTCT TCGTGTTCTC GGGCAACATG GCGCACATGC CTGCCATGCA GGAGTTCCTG
GGCGGGCTTA TGGGAAACCA CCCCATGCTG ACCAGCCTGT TCGCGAGCCA AATCATCAGC
AACGTCCCAT CAGCCGTACT GCTGGCAGGG TTCACCCAGA ACTGGCACTC GCTTCTGATA
GGCGTCGACC TGGGCGGACT GGGCACCCCG ATAGCATCTC TCGCGAGCCT CATCGCCTTC
CGCTGCTACA CGCACACTCG CGATGCGGAC ATTCTCCGGT TCATGCGCGA ATTCAGCATC
GCAAACGTAT TCGTTCTGGC GTGCATGGTG CTGCTCTACA CGGTCTTGTT TGTGACTTTC
TAA
 
Protein sequence
MLCIAFICAC ISMALTGDVE AAPSYIDWRV IILLFCLMAA VAGLRESGVL ARIAQTLVSG 
RRTKRVVCLA LVMLPFVTSM LITNDVALLT FVPIAILALE TAGWQDGLVR VIVLQAIAAN
LGGMVTPVGN PQNLFIFTTY DLTLADFFMT LAPFGALAFV LIAAACLAFG PTKADVELAV
DKHSVQYRRF ALHACLFAIS LLAVFHVFDH LVLLTAVVAA LFLFDRRIFL EVDYALLVTF
VCFFVFSGNM AHMPAMQEFL GGLMGNHPML TSLFASQIIS NVPSAVLLAG FTQNWHSLLI
GVDLGGLGTP IASLASLIAF RCYTHTRDAD ILRFMREFSI ANVFVLACMV LLYTVLFVTF