| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_13630 |
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| Symbol | |
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| ID | 8395254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1560675 |
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| End bp | 1562417 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644986118 |
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| Product | cysteine export CydDC family ABC transporter permease subunit/ATP-binding protein CydD |
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| Protein accession | YP_003143735 |
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| Protein GI | 257064063 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
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| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGATA AATCGCTCTT CTCGCTGCCC GGCATCATGC CGGTTATGGG AATGCTCGTG
GTGTTTGCGC TGGTGCTTTC CGCAAGCATC ATCGGCGAGG CGGTTTCGCT ATCCGCAGCC
ATAACCACCA TGTGGCAAGG CGGCTCTCTC GCACATGCGC TGCCGCATAT CGCGTTGTTC
TTCGGGTGTT TCGCGCTGCA GGCGCTCGTG CATCACCTGC AAGACGGCAT GCTCGACAGG
TTCGCCAACA AACAGGTTGA GTGCCTGCGC GGTGAGCTTC TGGCAGGCCT GTTCCGCACG
CGCGGGCAGA TGGTGCGTGA TAACGGGACG GCTGCTGTGA CTTGGTCGGT GCTTGAAGGC
GCCTCGCAGA CGGAAAACTA CCTGCGCATC ATACTGCCCA AGCTCGTTGG CGTGGTAGTA
ATTCCCTTTG TGCTTCTGAT CTGCTCGTTC GTGCTTGACC TTACGTCGGG CATCATCCTT
CTGGTCATGT ACCCGGTCAT CATCTTCTAT ATGGTCATGC TGGGCAAAGT CGCGAAGGCC
AGGGCCGAAA ACCAGTACGC TAAATACACG CGCATGTCGA ACCATTTCGT GGACACGCTG
CGCGGCATGG ACACCCTTCG GGCTTTCGGA CGCGGTCGCC AAAACGGCGA GCAGATCTAT
CAGACCAGCG AGGATTTCAG GGTAGCGACC ATCGACACAT TGAAGGTGGC CACGCTTTCA
AGCGCCGTGC TTGACCTGAT AGCAACGCTT GGTGTGGCAG GGGTTGCCAT CATGCTGGCA
TTTCACCTGG TAGACGGTTC CATCGGACTG TTCGCAGCGC TTGCAGTGCT GGTGCTTTCT
CCCGAATACT TCAAACCCAT CCGCCAGTTC GGCAGCGACT ACCATGCGTC TTTGGACGGT
AAGAACGCTT TGGCTGCCAT CGTGGGGATG ATCGATGCGG CAAAGGAAAC AGTGCCGGCC
CGCGAACATG CTGTAGCGCC ATGGTCGCCG TATAGCATGC TGGAGCTTGA CGAGGTCTCC
TACACCTACC CAGGTGCTGA TACACCTGCT TTAAAGGATG TGTACCTGTC TATCGAAGGT
TGCCAGAAGG TGGGCGTCGT CGGCGTAAGC GGCTCCGGAA AGTCCACTCT GGCAAGTCTG
CTTGCGGGTT TTGCATCGCC CGACGGAGGA ACAATCACCA TCGACGGCGC CACGTTCGAC
GCCGACGAGG GCGGACTCGG GTTTTCCGAT TGGCAGAATC AAGTGGCCTA CATTCCCCAA
GACCCATACG TGTTCGGCGT GAGCCTGCGC GACAACATCA GGTTTTACGC GCCGGAATCC
ACCGATGAGC AGGTCATGCG AGCCGTTGAA CTTGTCGGCC TGGATGAGCT TCTCGCGCAG
CTTCCCGAAG GGCTGGACAC GGTGATCGGT GAAGGCGGTC GCGCCTTGTC GGGCGGCCAG
GCGCAGCGCA TCGCATTGGC CCGCGTGCTT CTGGACGACT CACGGCGCAT CCTCATATTC
GACGAGCCCA CGGCACATCT GGACATCGAA ACGGAGCTGG AGCTTAAATC CCGCATGCTG
CCGCTGATGG AAGGCAGGTT GGTGATATTC GCCACGCACC GACTGCACTG GCTGGCAGAC
ATGGATTGGA TCATCGTCAT GGAAGATGGC GATGTGGCAG AGCAGGGCGA TTATCGCGAG
CTCCTGGCCG AGCGGGGCGC GCTTTGGCGC TTGGTCGAGA ACATGAACGG GGGTGCACGA
TGA
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| Protein sequence | MMDKSLFSLP GIMPVMGMLV VFALVLSASI IGEAVSLSAA ITTMWQGGSL AHALPHIALF
FGCFALQALV HHLQDGMLDR FANKQVECLR GELLAGLFRT RGQMVRDNGT AAVTWSVLEG
ASQTENYLRI ILPKLVGVVV IPFVLLICSF VLDLTSGIIL LVMYPVIIFY MVMLGKVAKA
RAENQYAKYT RMSNHFVDTL RGMDTLRAFG RGRQNGEQIY QTSEDFRVAT IDTLKVATLS
SAVLDLIATL GVAGVAIMLA FHLVDGSIGL FAALAVLVLS PEYFKPIRQF GSDYHASLDG
KNALAAIVGM IDAAKETVPA REHAVAPWSP YSMLELDEVS YTYPGADTPA LKDVYLSIEG
CQKVGVVGVS GSGKSTLASL LAGFASPDGG TITIDGATFD ADEGGLGFSD WQNQVAYIPQ
DPYVFGVSLR DNIRFYAPES TDEQVMRAVE LVGLDELLAQ LPEGLDTVIG EGGRALSGGQ
AQRIALARVL LDDSRRILIF DEPTAHLDIE TELELKSRML PLMEGRLVIF ATHRLHWLAD
MDWIIVMEDG DVAEQGDYRE LLAERGALWR LVENMNGGAR
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