Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_13520 |
Symbol | |
ID | 8395243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1546457 |
End bp | 1547758 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644986107 |
Product | DNA repair nucleotidyltransferase/DNA polymerase |
Protein accession | YP_003143724 |
Protein GI | 257064052 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGATACAC ACGAACAAAT ATCCGTATTC GGTTTTGAAG GTGAATGGAA CGGCCCTGCC ATCCTTCTGG TTGACCTGGA CGCCTTTTTC GCATCGGTCG AACAGTTGGA CCATCCTGCA TGGCGTGGCA AACCGGTCAT CGTCGGAGGC AATGCGGACA AGCACGGCGT GGTGTCCACG GCCAGTTACG AGGCCCGCGT GTACGGTGTG CACAGCGCCA TGCCCGCATC GCAGGCGCGC AGCCTGTGCC CTCATGCCAT CTGGACGCCC GGACATTTCG ACCGTTATCG TGAAATGTCC CGTAAGGTTA TGGCGATCAT CCACGACGAG AGCCCTCACG TGCAGCAAGT CAGTATCGAC GAGGCTTTTG TGGACGTGTC GCCGACGCGC GTAAACCGTG AAAGCCCGGT AAGCATCGCG CAACGCATCC AGTCTCGGGT GGCGAAGCTC GGCATCACGT GCTCAATCGG CGTCGGGACC AGCAAGACCA TTGCCAAAAT CGCCTCAGAC ATGGACAAGC CGCGGGGGCT TACGGTGGTA TTCCCCGGTC GTGAGCTCGA CTTCCTCTCC CCTCTTCCCG TTCGCGCCAT GTCTGGCGTG GGATCGCGGG CCGAAGAGTT GCTGAAGGCC CACGGCGTGG AGACCTTGGG GCAGATGGCA AAAGCCCCTG AATCGCTGCT GCATTCAATC TACGGCAAGA ATGCGGACAT GATGCGCAAC CGATGCCTGG GGCTTGACGC AACCGCGGTT GCACAGGACG ACACCGTGAA ATCCGTGTCC AGCGAAACCA CCATGGCTGA CGACCTTGTC ACCTTCGACG ACATTTCAGC AGTGGCGGGT TCGATGGCGG CCAAGACCTG CCGGCGCCTG CGTGCCAAGG GGCTGAAGGG CACAACGTTG GCTCTGAAAA TCCGCTTTTC GGACCGATCC ACCCGAAGCG TGCAGCAGCA GCTGGAAGAG CCCTCAGACA ATGAGCATGA GCTTATCCCG CTGCTCGACG CCATGATCGG GCACCTATGG AAGCCTGGCA TGAAAGTTCG TCTTATCGGG GTCGCGGTCA CCGGTTTCGA CGCCGATGAC CTGGTGCAGG ATTCCTTGTT CGACGCATCC GAGTACGACG ATGCGCCTCC GGAGCCACCT TCGCGCCATG TCATGTCCAA GGAGCAAGGC GAGCACCTCG CGTCGGCGAC CGACCTGGTC AAGAACCGGT TCGGTGAAGG CGCCCTGGTG TTCGGCCGCG ATTTGAAGAT GCGTTCCAAT ACCACCGGCA CAGCAGCTAA GAACCCCGAG GATTACCGGT AG
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Protein sequence | MDTHEQISVF GFEGEWNGPA ILLVDLDAFF ASVEQLDHPA WRGKPVIVGG NADKHGVVST ASYEARVYGV HSAMPASQAR SLCPHAIWTP GHFDRYREMS RKVMAIIHDE SPHVQQVSID EAFVDVSPTR VNRESPVSIA QRIQSRVAKL GITCSIGVGT SKTIAKIASD MDKPRGLTVV FPGRELDFLS PLPVRAMSGV GSRAEELLKA HGVETLGQMA KAPESLLHSI YGKNADMMRN RCLGLDATAV AQDDTVKSVS SETTMADDLV TFDDISAVAG SMAAKTCRRL RAKGLKGTTL ALKIRFSDRS TRSVQQQLEE PSDNEHELIP LLDAMIGHLW KPGMKVRLIG VAVTGFDADD LVQDSLFDAS EYDDAPPEPP SRHVMSKEQG EHLASATDLV KNRFGEGALV FGRDLKMRSN TTGTAAKNPE DYR
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