| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_13480 |
|---|
| Symbol | |
|---|
| ID | 8395239 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 1542526 |
|---|
| End bp | 1543500 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644986103 |
|---|
| Product | phosphoglycerate dehydrogenase-like oxidoreductase |
|---|
| Protein accession | YP_003143720 |
|---|
| Protein GI | 257064048 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.252096 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACGTA TCATCTGCGT GTGCATCGAA TGGCTGAACG ACCAACAGAA GCGTCAGATC
CAAGAAGTCG CGTCCAAGCT CGGATTCGAC GCCCGATTCT ACGTGAACGA CCAGGTAGAA
GGTGCGAAAT CCCGCATAGC CGAGGCGGAG ATCCTCTTCG CGCACTCGCC CGAGGCGCTG
CAGGCCGCAA CGGATCGCCT GAAATGGTAT TGCTGCTCGT TTGCGGGTGT TGATCCCTAC
TGCGCGCACC CCGAGTGGTT CCCTACGCAG GAATGCCTGC TCAGCTGCTC CTCTGGAGCC
TATGACGAAA CCATCGGCGA ACACTTGGTC ATGACCACCC TCATGCTGCT GCGCCGCATG
CCCGAATACG CTCGGATCAC CGCTGAACGC CGTTGGGAAA ACCAGCTTCC TATCAGGTCG
ATTCGTGAAG TCCAGATAGG CGTTCTGGGA GCCGGCAACA TCGGTTCGGA ATACGCCCGC
AAGGTCTTGA GCCTGGGCGC CAGGCCCGTC ATCGGCATCA GCCGAACAGG TGCGCCCCGC
GAACCCTTCG ACCAGGTCTT CCCTATCGCC CAGCTGGACG AAGTGCTCCC CCGCCTAGAC
GTCCTGGTCA TGGCGCTGCC GGGCACCCCG GAAACGCAGG GCGTCCTGAC GAAGGACCGC
ATCGCGCTGC TTCCCGAAGG CGCGCTTGTG ATCAACGTGG GCCGCGGAAC GGCCGTAGAC
CAGCCGGCGC TCATCGAGGC CCTCGAAAGT GGGCATCTGG CAGGCGCTGC GCTGGACGTG
ATGTCGCCTG AGCCCCTGCC GGCAGACCAT CCGCTGTGGG ACGCTAAGAA CATCCTGATC
ACGCCCCATG TTTCAGGCAA CATGACCATG GCATGGACCC GTGACGAGTG CGTGCGCCTG
TTCTGCGAGG ACCTGAAGAA CTACGCTTCT GGCAGGCCGC TCGCCCGCCT GGTCGACCGC
ACATTGGGGT ATTAG
|
|---|
| Protein sequence | MERIICVCIE WLNDQQKRQI QEVASKLGFD ARFYVNDQVE GAKSRIAEAE ILFAHSPEAL
QAATDRLKWY CCSFAGVDPY CAHPEWFPTQ ECLLSCSSGA YDETIGEHLV MTTLMLLRRM
PEYARITAER RWENQLPIRS IREVQIGVLG AGNIGSEYAR KVLSLGARPV IGISRTGAPR
EPFDQVFPIA QLDEVLPRLD VLVMALPGTP ETQGVLTKDR IALLPEGALV INVGRGTAVD
QPALIEALES GHLAGAALDV MSPEPLPADH PLWDAKNILI TPHVSGNMTM AWTRDECVRL
FCEDLKNYAS GRPLARLVDR TLGY
|
|---|
| |