Gene Shel_13470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_13470 
Symbol 
ID8395238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1541563 
End bp1542516 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content61% 
IMG OID644986102 
Productglutamyl- or glutaminyl-tRNA synthetase 
Protein accessionYP_003143719 
Protein GI257064047 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.301512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGTCG AAACGCATAC CGCTTTAGAA AACGCCCCTG TGAAGGGGCG TTTCGCTCCG 
TCGCCTACGG GTCGCATGCA CGCCGGCAAC ATCTACGCTG CCCTGTGCGC CTGGCTGGTC
GCGAAATCGC AAGGCGGATC CATCGTGCTG CGCATCGAGG ATCTGGACAG GGAACGCTCC
AAGCATGAAT ACATCGATGC GGTGCAGCGC GATTTTGAAT TCCTAGGGCT GACCTGGGAC
GAAGGGCCGT ATTTCCAGAG CGGGCGCGAC GAGGCGTACC AGCAGGCCTT CGACACGCTT
GTTGAGAAAG GCCTGGTCTA CCCATGCTAC TGCACCAGGG CCGATTTGCA TGCCGCATCG
GCTCCGCACA GGGGAGAGAA GCTGATCTAT GCCGGCACCT GCCGAAACCT GACGGCCGCA
CAGCGTGCGC AACGGGAGCT TTCCCGAAAA CCTGCCCAGC GCCTCATCGT GCCCGACGAG
GTGTACGCAT TGGACGATCT GGTCCAAGGG CATTACGAAC AGAACCTGGC GCACGACTGC
GGAGACTTCC TCATCCGCAG GTCGGACGGC GCCTTCGCCT ATCAGCTGGC CGTTGTGGTC
GACGACGCCG CCCAAGGCGT GAACTCCGTG GTTCGTGGGA TGGACCTGCT GTGCTCGACG
CCCCAGCAGA TCTACCTGCA GCGGATTCTG GGGCTTTCTG AGGCCCAGTA TGCCCATGTG
CCGCTCCTTG TAGCAGAAAG GAACCGTCGC CTGTCCAAGC GTGACCATGA CGCGTCAATC
GACTGCTTGC TCGAGCGTTT CAAGAGTCCG GAAGCTATCG TTGGGCATAT CGCGGGCATT
ACAGGGCTTG CGCCCAACTG CGATCCCGCC ACGCCGGAAC AGCTTCTGGA GACGTTCACG
ATCGGCCGGC TCTCAACCTG CTTCGACGAT CTTGTCCAAA TCCAGTGGCG CTAG
 
Protein sequence
MPVETHTALE NAPVKGRFAP SPTGRMHAGN IYAALCAWLV AKSQGGSIVL RIEDLDRERS 
KHEYIDAVQR DFEFLGLTWD EGPYFQSGRD EAYQQAFDTL VEKGLVYPCY CTRADLHAAS
APHRGEKLIY AGTCRNLTAA QRAQRELSRK PAQRLIVPDE VYALDDLVQG HYEQNLAHDC
GDFLIRRSDG AFAYQLAVVV DDAAQGVNSV VRGMDLLCST PQQIYLQRIL GLSEAQYAHV
PLLVAERNRR LSKRDHDASI DCLLERFKSP EAIVGHIAGI TGLAPNCDPA TPEQLLETFT
IGRLSTCFDD LVQIQWR