| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_13350 |
|---|
| Symbol | |
|---|
| ID | 8395226 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 1528660 |
|---|
| End bp | 1531479 |
|---|
| Gene Length | 2820 bp |
|---|
| Protein Length | 939 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644986090 |
|---|
| Product | NADH:ubiquinone oxidoreductase subunit 5 (chain L)/multisubunit Na+/H+ antiporter, MnhA subunit |
|---|
| Protein accession | YP_003143707 |
|---|
| Protein GI | 257064035 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0650] Formate hydrogenlyase subunit 4
[COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCATTGCC GCCCTGGTGA TGCTGGCAGC ACGGACGGAT TCAGCCCGCG ATGTGCTTTT
ACCATCGCAT TCGCGGCGGC AATCGCCATT CTGTCCATCG TGTTTGCGGC CATGTTCATG
GGCTCACAGC CCACTGTGTT CATGCTGCCG CCCGAGTACA CGCCGTGGCT CAGCCGGATC
AATCTGATCT TAGACCTGAC GGTATCGGCG TTCATCGTGT GCTACGCGTT GAAGTACCGC
CGCACGATCA CGTTCGCGCT GATCGCCATC CAGATCGTGC TTACGACCTG GCTGGAGTTC
ACCATGCGTG GCGGCGAGCA TTTCACAAGC CAGATGTACA TCGATTCCTT CACGGTCATC
ATGGTGCTGA TCATCGGCAT CGTGGGTTCG GGCATCATCG TATACGCCCT GGGCTACATG
AAGGATTGGC AGGCCCATCA TGAGGACCAG AAGGATCGCC GTCCGTGGTT CTTCGCCATC
ATGTTCGCCT TCCTGTCCGC CATGTACAAC ATCGTGATCA GCGACGACTT CGGCTGGATC
TACACCGCCT GGGAAATCAC CACGCTGTGC TCGTTCCTGT TGATCGGCTT CGCCAAGACT
GAAGAGGCCC TCAACAACGC GTTCCTGCAG ATCAAGCTGA ACATGATCGG CGGCATCGCC
TTCCAGGTGG GCATCGCGTT CCTCAGCTTG AACGGCCTGC CTATGCTTTT CAGCGAGTTC
ATCGCCTACG GCTCCGCCGG CAACGCCATC GTCGCTTTCC CGGTCGCCTG CCTGGCGCTG
GCCGGTATGA CGAAGGCCGC GCAGATGCCC TTCCATTCGT GGCTGCTCGG AGCCATGGTG
GCACCTACGC CTACCAGTGC GCTTCTGCAC TCCTCCACGA TGGTCAAGGC CGGCACGTTC
CTGCTGCTGC GTCTGGCTCC GCTGTTCGTC GTGTGCCCCA CTGCATCTTA TATGACCATC
TTCGTCGGCG GCTTCACATT CCTGATGGCA TCGCTTATGG CCATCTCACA GACCAACGCC
AAACGCGTCC TGGCTTACTC GACCATCGCC AACCTCGGCC TGATCACGGC TTGCGCCGGC
GTCGGTACGC CTGAGGCCGT GTGGGCGGGC GTCTTCCTGG TCATCTTCCA CGCTGTGGCC
AAGTCGCTGC TGTTCCTCTG CGTCGGCACC GCCGAGCACC ACATCGGCTC TCGCGACATC
GAGGACATGG ACGAGCTGTT CAACCGCATG CCGCGGCTGG CCCGCCTCAT GATGCTCGGC
ATCATGGGCA TGTTCGTGGC CCCCTTCGGC ATGCTCATTT CCAAGTGGGC GACGCTGCAG
TCCTTCGCAT CTACCGGGCA GGTCGTGCTC ATTGCGCTTC TGGCATTCGG TTCTGCTGCA
ACTTTCCTCT TCTGGGCCAA GTGGCTGGGT AAGCTCTCCG GCATCGCAGC GCATGCTGAG
AACATCGAGC TCGACGTTCA TAAGAGCGAA TGGGCTGCTC AAGGCCTCAT GGCCGCCTTG
GTCGCCCTCT GCTGCGTCTG CATGCCGCTG CTTTCCACCT ACCTTGTCGA GCCGTTCCTG
GTCAACACCT ACGGCACCTT CGGAAACACC ATCGGCATGG ACAACATGCT GCTGATGGGC
CTGATCGTCG CCCTTTTGGT GGTCGTCCTT TTCGGCACGC TGGGCAAGAA GCCCGTCAAG
CAGACGAGCA TCTACCTGGC AGGCATCTCC GTCGACAACG AGGCTCGCAC GTTCAAGGGT
TCGCTTGGCA ATGTCCGCAC GGCAACGGGC CGCAATTGGT ACCTTGCCGA CATCTTCGGC
GAGGCCAAGC TCGACTATCC TTCCGTCGTG CTTCCCATCG TCGCCATCGC CATCGGCATC
TGCGCCTCGT TCCACTTCGC GATGACCAGC CCGACCACCG TGGTGTCGCT GGTCCTGTAT
GCAACCGTCG GAACGACTGG CAATACGCTG CTGCGCATTC TCATCGGCAC CTTGGCGTTC
GCAATCCTGG CTCCTGTTAT CGGCTGCCTG CTTGCCGGCA TCGACCGTAA GCTCACAGCG
AAGATGCAGG GTCGTGTCGG TCCTCCGCTG CTGCAGCCTT ATTATGACGT GCAGAAGCTG
ATTGCCAAGG ACGACGTCCA TGTGAACTCC GTCGAGGGAA CCTACGTCAC CGCAGCACTC
ATCTTCGCTG TGCTGGCAGG CGGCATCTTC TACGGCGGCG GAAACTTCCT GCTGTGCGTG
TTCCTGGTCA CCCTGTCCGG CCTTATGTTC ATCCTGGCAG CCTACTCCAC GCGTTCGCCC
TACGCCGAAG TCGGCGCCGA CCGCGAGGCT CTGCAGGTCA TGTCCTATGA GCCCATGCTC
ATGTTCTTGG CCGTTGGTCT GTTCCTGACG CTGGGCACCT TCGACGCCTC CGGCGTGTTC
CTCTACGATG CTCCGCCCAT CGTGGCCCTG TGGCCCATCT TCATCGGCTT GATGTTCATT
CTGACCATCA AGCTGCGCAA GTCGCCGTTC GACCTGTCCT ATTCGCACCA TGCGCATCAG
GAGCTGGTCA AAGGCATCAC CACCGAGATG AGCGGCAAGA CCCTGGCGAA GATCGAGGTC
ATGCACTGGT GCGAGAGCGT CCTGTTCCTG GGCTGGGTCG GCATGTTCTT CGTGTGCCAT
AACCCGCTGT CGTTGGTACT GGCTGTCGTG GTCGCCTTCC TGGCGTTCTT CCTCGAGATC
TTCATCGACA ACAACTTCGC CCGTGTGAAG TGGCAGTCGA TGCTCAAGTG GGCCTGGATC
ATCTCCGGCG TGCTGGGCAT TGCCAATATC GCGGCACTGG TCATCTTCAA CGTCCTTTAG
|
|---|
| Protein sequence | MHCRPGDAGS TDGFSPRCAF TIAFAAAIAI LSIVFAAMFM GSQPTVFMLP PEYTPWLSRI
NLILDLTVSA FIVCYALKYR RTITFALIAI QIVLTTWLEF TMRGGEHFTS QMYIDSFTVI
MVLIIGIVGS GIIVYALGYM KDWQAHHEDQ KDRRPWFFAI MFAFLSAMYN IVISDDFGWI
YTAWEITTLC SFLLIGFAKT EEALNNAFLQ IKLNMIGGIA FQVGIAFLSL NGLPMLFSEF
IAYGSAGNAI VAFPVACLAL AGMTKAAQMP FHSWLLGAMV APTPTSALLH SSTMVKAGTF
LLLRLAPLFV VCPTASYMTI FVGGFTFLMA SLMAISQTNA KRVLAYSTIA NLGLITACAG
VGTPEAVWAG VFLVIFHAVA KSLLFLCVGT AEHHIGSRDI EDMDELFNRM PRLARLMMLG
IMGMFVAPFG MLISKWATLQ SFASTGQVVL IALLAFGSAA TFLFWAKWLG KLSGIAAHAE
NIELDVHKSE WAAQGLMAAL VALCCVCMPL LSTYLVEPFL VNTYGTFGNT IGMDNMLLMG
LIVALLVVVL FGTLGKKPVK QTSIYLAGIS VDNEARTFKG SLGNVRTATG RNWYLADIFG
EAKLDYPSVV LPIVAIAIGI CASFHFAMTS PTTVVSLVLY ATVGTTGNTL LRILIGTLAF
AILAPVIGCL LAGIDRKLTA KMQGRVGPPL LQPYYDVQKL IAKDDVHVNS VEGTYVTAAL
IFAVLAGGIF YGGGNFLLCV FLVTLSGLMF ILAAYSTRSP YAEVGADREA LQVMSYEPML
MFLAVGLFLT LGTFDASGVF LYDAPPIVAL WPIFIGLMFI LTIKLRKSPF DLSYSHHAHQ
ELVKGITTEM SGKTLAKIEV MHWCESVLFL GWVGMFFVCH NPLSLVLAVV VAFLAFFLEI
FIDNNFARVK WQSMLKWAWI ISGVLGIANI AALVIFNVL
|
|---|
| |