| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_13290 |
|---|
| Symbol | |
|---|
| ID | 8395220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 1519745 |
|---|
| End bp | 1520701 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644986085 |
|---|
| Product | 1-phosphofructokinase |
|---|
| Protein accession | YP_003143702 |
|---|
| Protein GI | 257064030 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1105] Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) |
|---|
| TIGRFAM ID | [TIGR03168] hexose kinase, 1-phosphofructokinase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTATA CGGTCACGTT CAATCCGGCG CTCGATTGCG TCGTGCGCGT TTCCAACGTC
AAGCACGGCA TCGTCAACCG TTGCGTTCAG CAGGACATCT ACTACGGCGG AAAGGGCGTG
AACGTTTCGG TTGTCCTGAA CAACATCGGC ATCCCGAACA AAGCCCTCGG TTTCGCCGCC
GGCCCTACTG GACAGGCGCT GCTCACGGGC ATCGAATCCA TGGGCGTCGA CCACGATTTC
GTCATGCTTC CCGAAGGTCA GACCCGCATC AATGTGAAGA TGGTCGAAAT CGCCGATGCC
GATGACGTGT ATGCCGCTGG TGAGGAAACC GCTATCAACG CATCGGGGCC CAACATCGAC
GCTGCCTCTC TTTCTGCCTT GAATGAAACG CTGGAACAGA CTCGTGAAGG CGACATCGTC
GTTTTGTCAG GCGCAGCCCA CAAGTCCGTC CCCGTTGATG CATACGCGAG CATCGTCGCC
GCTCAGGCTG CCAAGGGTGT TCGCACCGTG GTTGACGTGA CCGGCCCCGT GCTCGACTGC
GCGCTTTCTG CCGGCCCCTT CCTGGTCAAG CCCAACGACG AGGAGATCGC CGAAATCCTG
GATGTGGAAG ACCCCACCTT CGACCAGATT GTCGAAGGAG CCCGCATGCT TCAGGAAAAA
GGTGCTGTCA ACGTCATCGT TTCCTTAGGA TCGAAGGGCT CGGTGCTGTT GGACGAGTTC
GGCAACCTTC ACCAGGCGCC CCTCATCAAA GGCAAGCTCG TGAACTCCGT CGGCGCAGGC
GACTCCATGG TCGCAGGTTT CGTCGGCGGC TACCAGCAGG CCGTCGAGGC GGGGCTTTCC
GGCTACGAGC GCTACGAGCA CGCTTTCAAG CTGGCCCAGG CCTGCGGATC GGCAACGGCG
TTTTCCGCCG GACTTGCCGA AAAGGACCTG GTAGACGAAC TGCTTGCACG TCTTTAG
|
|---|
| Protein sequence | MIYTVTFNPA LDCVVRVSNV KHGIVNRCVQ QDIYYGGKGV NVSVVLNNIG IPNKALGFAA
GPTGQALLTG IESMGVDHDF VMLPEGQTRI NVKMVEIADA DDVYAAGEET AINASGPNID
AASLSALNET LEQTREGDIV VLSGAAHKSV PVDAYASIVA AQAAKGVRTV VDVTGPVLDC
ALSAGPFLVK PNDEEIAEIL DVEDPTFDQI VEGARMLQEK GAVNVIVSLG SKGSVLLDEF
GNLHQAPLIK GKLVNSVGAG DSMVAGFVGG YQQAVEAGLS GYERYEHAFK LAQACGSATA
FSAGLAEKDL VDELLARL
|
|---|
| |