| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_13250 |
|---|
| Symbol | |
|---|
| ID | 8395216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 1514751 |
|---|
| End bp | 1515383 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644986081 |
|---|
| Product | endonuclease III |
|---|
| Protein accession | YP_003143698 |
|---|
| Protein GI | 257064026 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0177] Predicted EndoIII-related endonuclease |
|---|
| TIGRFAM ID | [TIGR01083] endonuclease III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGCCA GAGCGGCAGC CATCGAAGAG CGCCTGTTCG CCATCTACGG CGAAGGCGAG
TGCTCGCTTG ACCACGCAGA CCCCTTCTCG TTGACCGTTG CCGTCATCTT AAGCGCCCAA
TGCACCGACG CTGCCGTCAA CAAGGTGACG CCTGCGCTGT TCGCGAAGTA CCCCACCCCG
GCCGACCTGG CCGCCGCAAA ACTCCAGGAT GTGGAAGACA TAATCCATCC TTTGGGGTTC
TTTCATTCTA AGGCGAAAAA CCTCATCGCC TGCGCCCAGA AGGTCGTCGC CGACTACGGC
GGAGAAATCC CCGAATCCAT GGAGGGCCTG CAGAGCCTTC CCGGCGTTGG CCGAAAGACA
GCCAACGTGG TCATGTGCCA AGCGTTCCGC AACGCTCAAG GCATCGCCGT GGACACCCAC
GTGTTCCGCA TCGCCCACCG TTTGGGCTTC GCCACGCGAA ACGACGACAC GCCCGACAAG
GTTGAAGCCA AGCTGCTCAA GGTTTACCCG CAGACAGACT GGCTTTACAT CAACCACCAA
TGGGTGCACT TCGGACGGGA GTTCTGCAGC GCCCGAAATC CCAAATGCCT GACATGCCCC
ATCCACGACC TGTGCCCAAG GCGCGGCGTG TAG
|
|---|
| Protein sequence | MRARAAAIEE RLFAIYGEGE CSLDHADPFS LTVAVILSAQ CTDAAVNKVT PALFAKYPTP
ADLAAAKLQD VEDIIHPLGF FHSKAKNLIA CAQKVVADYG GEIPESMEGL QSLPGVGRKT
ANVVMCQAFR NAQGIAVDTH VFRIAHRLGF ATRNDDTPDK VEAKLLKVYP QTDWLYINHQ
WVHFGREFCS ARNPKCLTCP IHDLCPRRGV
|
|---|
| |