Gene Shel_13240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_13240 
Symbol 
ID8395215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1514173 
End bp1514718 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content58% 
IMG OID644986080 
Productphosphopantothenoylcysteine synthetase/decarboxylase 
Protein accessionYP_003143697 
Protein GI257064025 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.494798 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGAA ACATCCTTTT CGCCGTATCG GGCGGCATTG CCGCATACAA GGCTTGCGAC 
GCGGTGTCCA AGCTGCGTCA GGCGGGTTGC GAAGTCAGAG TGATCATGAC CAAGCATGCC
GCCGAGCTGG TGGCTCCTGC GACATTCGAG GCCCTGACCG GCAACAAAGT GTACACCGAT
ACCTTCGACT TCAGCGACGA TGCGTCCATC AAGCATATCG TGTTCGCTCA GCAGGCTGAT
GTGTTCGTGG CGGCTCCTGC AACGGCGAAC CTGATTGCAA AGTTCGCGCA CGGCATTGCG
GACGACATGG TCACATCGAC GTATTTGGCG GCAACCTGTC CGGCTGTGGT GTGCCCGTCC
ATGCACGCCA ACATGTATGC CAACACGGCG ACGCAGGAGA ATCTGAAGAC GCTTGAGCGT
CGCGGCGTGA TGCTTGTGGG ACCTACTGAA GGTCGACTTG CATCGGGCGA TATGGGACGT
GGACCCCTGG CGCCAGTGAA CGAGATTATA GACGCCGTGC TCAAACAGCT TGAAGCAGTC
GAATAA
 
Protein sequence
MSRNILFAVS GGIAAYKACD AVSKLRQAGC EVRVIMTKHA AELVAPATFE ALTGNKVYTD 
TFDFSDDASI KHIVFAQQAD VFVAAPATAN LIAKFAHGIA DDMVTSTYLA ATCPAVVCPS
MHANMYANTA TQENLKTLER RGVMLVGPTE GRLASGDMGR GPLAPVNEII DAVLKQLEAV
E