Gene Shel_13210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_13210 
Symbol 
ID8395212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1508854 
End bp1509192 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content58% 
IMG OID644986077 
Productpredicted membrane protein 
Protein accessionYP_003143694 
Protein GI257064022 
COG category[S] Function unknown 
COG ID[COG4392] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.705177 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTGC AGGCCTTCTT CCTCATTTTC GGGCTATGTT CCATCACCAT GCTCATCAGC 
CGCGTGGCGC CTATGTTCTT GCTGAAAGGC AAGGAGCTTC CCGACACCTT CGTCACGGCG
CTCGGCTTCA TTCCGCCTGC AGCATTTGCG GCTCTTGTCA CGAACGACCT CTTTAAACCC
GAGCTGTTCA GCCAAGACGT GTCAACGTGG CTCTTCCCGA TGATCGCTGC GGCCATCGTC
GTGGTGGTGG GTGTCAAGAC CAAATCCATG GCCTGGTGTA TCGTCGCGGG CGTCGGCACG
TTCGCCGCGC TCATCTACGT GCCGGGTTTG GTGTTCTAA
 
Protein sequence
MSVQAFFLIF GLCSITMLIS RVAPMFLLKG KELPDTFVTA LGFIPPAAFA ALVTNDLFKP 
ELFSQDVSTW LFPMIAAAIV VVVGVKTKSM AWCIVAGVGT FAALIYVPGL VF