| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_13200 |
|---|
| Symbol | |
|---|
| ID | 8395211 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 1508136 |
|---|
| End bp | 1508852 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644986076 |
|---|
| Product | predicted branched-chain amino acid permease (azaleucine resistance) |
|---|
| Protein accession | YP_003143693 |
|---|
| Protein GI | 257064021 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) |
|---|
| TIGRFAM ID | [TIGR00346] 4-azaleucine resistance probable transporter AzlC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.754483 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGAAGAGG TAAAAGAAGC ATTCAAGGCG GCGTGGCCCA TCATGGTGGG CTATATCGTG
TTGGGCCTGC CCTGCGGCAT ACTGTGCGCC GCAGCGGGCA TGGACGTCTG GATGGTTGCG
CTCATGGGTG CACTGTTCTA TTCCGGCGCA GGTCAATATA TGATTCCGAA CATGTGGATG
GCCGGCAACC CGATAAGCGC CATCGTGCTT TCGGTCACGT TGGTGAACAC GCGTCAGATG
CTGTACGGCG CATCGCTGTC GCAGTTCTGC GGGACGGCCG GCAAATTCCT CACCTTCAAT
TTCGGGGCGT CGGTCACCGA CGAGAGCTTC GGCGTGAACC TGGCCCGTTT CATGAACGGC
AACTGGACGG TGCGCAAGGC TCTGCTGGTC AACATCATGT CGCAGTCCAT GTGGTTCTCT
TCAAATGTGG TCGGGTGCAT CGTCGGCACG GCGATCTCCG TTCCTGCGGC TTTGGCCTCG
TTCGCCATGA CGTCTCTGTT CATCTGTCTG CTGTGCATGC AGAAGCTGAG CGTGGAAAAC
GGCGTGGCTG TCGTCGGATC CATCTTGGGC GTGATCGTGT GCAAGCTCGC AGGGCTTTCG
GGTCCGGCCA TTCTGATCGG CGCGCTTGTG GGCGTGTTCT CGGCGCTGGC GTTTTCGCTG
CGTCGCACGG CAAAAGGAAA ACCAAGCGGC GCCACCGACA TCAAGGTGGT GAGCTGA
|
|---|
| Protein sequence | MEEVKEAFKA AWPIMVGYIV LGLPCGILCA AAGMDVWMVA LMGALFYSGA GQYMIPNMWM
AGNPISAIVL SVTLVNTRQM LYGASLSQFC GTAGKFLTFN FGASVTDESF GVNLARFMNG
NWTVRKALLV NIMSQSMWFS SNVVGCIVGT AISVPAALAS FAMTSLFICL LCMQKLSVEN
GVAVVGSILG VIVCKLAGLS GPAILIGALV GVFSALAFSL RRTAKGKPSG ATDIKVVS
|
|---|
| |