Gene Shel_13000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_13000 
Symbol 
ID8395191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1492691 
End bp1493011 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content55% 
IMG OID644986056 
ProductLSU ribosomal protein L21P 
Protein accessionYP_003143676 
Protein GI257064004 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0261] Ribosomal protein L21 
TIGRFAM ID[TIGR00061] ribosomal protein L21 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000143169 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.099784 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGCTA TCGTAAAAAC CGGTGGAAAA CAGTACAAGG TTGCTCCCGG CGACATCCTT 
TCCGTCGAGA AGCTGGACGT TGCCACGGGC GAACAGGTCG AGCTTGAGGC CATCTGCGTC
GTCAACGACG GCAAGGTCGA GCTCGAAGAT GCCGCAGCAA CCAAGGTTGT CGCGACTGTT
CTTGAGCAGT TCAAGGGCGA GAAGCAGCTC GTCTTCAAGT TCAAGAAGCG CAAGAATTAT
AAGAAGCTGC AGGGTCATCG TCAGAAGTTG TCCCGCATCA AGATCGACAG CATCGGCGGC
GTTGCTGCCG ACGCTCAGTA A
 
Protein sequence
MYAIVKTGGK QYKVAPGDIL SVEKLDVATG EQVELEAICV VNDGKVELED AAATKVVATV 
LEQFKGEKQL VFKFKKRKNY KKLQGHRQKL SRIKIDSIGG VAADAQ