Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_12980 |
Symbol | |
ID | 8395189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1488584 |
End bp | 1489483 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644986054 |
Product | hypothetical protein |
Protein accession | YP_003143674 |
Protein GI | 257064002 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0496287 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0830373 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCAAAT ACTACTGCTC ATGGTGCGGT GCCGAGCTGG AGCCGGGCGC GCATTACTGT AACGAATGCG GCGCACGGGC GCCTGAGATC ATCACCGTGG ACGGATCCCG GGATGCCATC GACCGCATGC GCGGCATCGA CATCGTCGGC GGCGAATCCA TTCCCGCGTC CGACACCCAG CGTATGGACA AAGGCGCCAT CTCGGACCGT GTGGTCGTGT CCGGCGGTCG GGCCACGCGT TATTCCAGCG AATCCGGCAT TCCCAAGAGC AAGAAACACA TCGTCATCGG CGTGGCTGCC GCGGCATGTC TGGTCGCCGC CCTCGTTGGC TTCTACTTCA TCTGGGCCGA CAAGAACGTC GACCTGCCTG CCTCCGGCAA CAGCCTGGAC GGTACGGAAA CCACCCAGGT CGAAGCCATC ACGCCCACCG AGAACATTGC CGACGCCCCT GCCGCCCCGT CTGACAGTGA AGTGTACACC CAGCTCGTGA GCTATTACGA GAATCTGGGC ATCTACAAGA ACCGACTGTT CACGTGCCTG GACGAGTTCA ACAACGGATT CGTGGACCCC TCGCAGGCCG TTCGAGAAGG CTATTACGCG AACGCGTTGT CGCTGTTGGA GGACTTGCAG AACGACCTGG ACAACCTGAA CGCCATGGAG CTTGCGGACG ATTCGGTGTA TGTGGAGGAC CTGGAGAACC AGAAGCTTCT CTACGAGTAC ATGATCGGCC GCATACAGCC CTTGGTCGAT GCGTGGGCCC TCAGCGTGAG CTACGACGAC CCCACAACCC ACAGCGAAGA GATCCTTGCC GAGCTGAGCA AAGATTACGT CAACGGCGAA AACCCCAACA TCGCGCTGTA CGACAACCTG TACTGGCAGG CAAAACCGAA GCAGAAGTAG
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Protein sequence | MAKYYCSWCG AELEPGAHYC NECGARAPEI ITVDGSRDAI DRMRGIDIVG GESIPASDTQ RMDKGAISDR VVVSGGRATR YSSESGIPKS KKHIVIGVAA AACLVAALVG FYFIWADKNV DLPASGNSLD GTETTQVEAI TPTENIADAP AAPSDSEVYT QLVSYYENLG IYKNRLFTCL DEFNNGFVDP SQAVREGYYA NALSLLEDLQ NDLDNLNAME LADDSVYVED LENQKLLYEY MIGRIQPLVD AWALSVSYDD PTTHSEEILA ELSKDYVNGE NPNIALYDNL YWQAKPKQK
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