Gene Shel_12980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_12980 
Symbol 
ID8395189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1488584 
End bp1489483 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content60% 
IMG OID644986054 
Producthypothetical protein 
Protein accessionYP_003143674 
Protein GI257064002 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0496287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0830373 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCAAAT ACTACTGCTC ATGGTGCGGT GCCGAGCTGG AGCCGGGCGC GCATTACTGT 
AACGAATGCG GCGCACGGGC GCCTGAGATC ATCACCGTGG ACGGATCCCG GGATGCCATC
GACCGCATGC GCGGCATCGA CATCGTCGGC GGCGAATCCA TTCCCGCGTC CGACACCCAG
CGTATGGACA AAGGCGCCAT CTCGGACCGT GTGGTCGTGT CCGGCGGTCG GGCCACGCGT
TATTCCAGCG AATCCGGCAT TCCCAAGAGC AAGAAACACA TCGTCATCGG CGTGGCTGCC
GCGGCATGTC TGGTCGCCGC CCTCGTTGGC TTCTACTTCA TCTGGGCCGA CAAGAACGTC
GACCTGCCTG CCTCCGGCAA CAGCCTGGAC GGTACGGAAA CCACCCAGGT CGAAGCCATC
ACGCCCACCG AGAACATTGC CGACGCCCCT GCCGCCCCGT CTGACAGTGA AGTGTACACC
CAGCTCGTGA GCTATTACGA GAATCTGGGC ATCTACAAGA ACCGACTGTT CACGTGCCTG
GACGAGTTCA ACAACGGATT CGTGGACCCC TCGCAGGCCG TTCGAGAAGG CTATTACGCG
AACGCGTTGT CGCTGTTGGA GGACTTGCAG AACGACCTGG ACAACCTGAA CGCCATGGAG
CTTGCGGACG ATTCGGTGTA TGTGGAGGAC CTGGAGAACC AGAAGCTTCT CTACGAGTAC
ATGATCGGCC GCATACAGCC CTTGGTCGAT GCGTGGGCCC TCAGCGTGAG CTACGACGAC
CCCACAACCC ACAGCGAAGA GATCCTTGCC GAGCTGAGCA AAGATTACGT CAACGGCGAA
AACCCCAACA TCGCGCTGTA CGACAACCTG TACTGGCAGG CAAAACCGAA GCAGAAGTAG
 
Protein sequence
MAKYYCSWCG AELEPGAHYC NECGARAPEI ITVDGSRDAI DRMRGIDIVG GESIPASDTQ 
RMDKGAISDR VVVSGGRATR YSSESGIPKS KKHIVIGVAA AACLVAALVG FYFIWADKNV
DLPASGNSLD GTETTQVEAI TPTENIADAP AAPSDSEVYT QLVSYYENLG IYKNRLFTCL
DEFNNGFVDP SQAVREGYYA NALSLLEDLQ NDLDNLNAME LADDSVYVED LENQKLLYEY
MIGRIQPLVD AWALSVSYDD PTTHSEEILA ELSKDYVNGE NPNIALYDNL YWQAKPKQK