Gene Shel_12970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_12970 
Symbol 
ID8395188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1487608 
End bp1488513 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content60% 
IMG OID644986053 
ProductGTP-binding protein Era 
Protein accessionYP_003143673 
Protein GI257064001 
COG category[R] General function prediction only 
COG ID[COG1159] GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00436] GTP-binding protein Era 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.327957 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.141984 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACATA CGTTTAAGAG CGGCTTCGTC ACGTTGGTGG GACGCCCGAA CGCAGGCAAG 
TCAACGCTGA TCAACGCTGT GGTGGGCCAT AAGGTGGCCA TCACGTCGAA CACGGCCCAG
ACCACCCGGC ACCGTTTCAG CGCGATTGTG ACGCGCGATG ACATGCAGAT CATCATGGTT
GACACGCCGG GCTTGCACAA ACCTCACGAT GCGCTGGGCC AGGAGCTCAA CACCTCTGCC
ATCAAGGCCA TGGAGGACGT GGATGTCGTG GCCATGCTGA TCGACTGCTC CAAACCCATC
GGCCGCGGCG ACGAATGGGT TGCTGCCCAG GTGAACGAGG TGCATGCGCC CCATAAGATT
CTCATTCTGA CCAAGGCCGA CCTGGTCGAG CCCAAGGTGA TCGAAGAGCA GATGAAGGCC
GCCAAGAGGC TGGCTCGCTG GGATGAGATC GTTGTTCTGT CGGCCAAGAC CGGCAAGAAC
GTATCCGGCT TCGAAGAAGC CGTGGCCACC TGGCTTCCCG AAGGCCCCAA GTGGTTCCCG
GACGACATGG ACACCGACCA GCCGCTGGAA GTCATCGTGG CCGAGTTCAT CCGTGAGAAG
ATCCTGCGCA GCTTCCGCGA CGAAGTGCCC CACAGCATCG GCGTGGTCAC CGAGGACATG
CAATACGAGC GTAAGAAGGA CTTGTATAAG ATCTACGCGA CCATCTACGT GGAGCGTGAC
AGCCAGAAGG GCATCATCAT CGGCAAGGGC GGCCAGGCCA TCAAACAGAT CGGCATCGAG
GCCCGCAAGG ACCTGGAGCA GCTTCTGGGC TGCGGCGTGT ACCTGGACCT CAACGTGAAG
ATCAAGAAGA ACTGGCGACG CGACCTGAAC CAGATCCGCC GATTCGGATA CGGCGAAGGA
ATCTAG
 
Protein sequence
MAHTFKSGFV TLVGRPNAGK STLINAVVGH KVAITSNTAQ TTRHRFSAIV TRDDMQIIMV 
DTPGLHKPHD ALGQELNTSA IKAMEDVDVV AMLIDCSKPI GRGDEWVAAQ VNEVHAPHKI
LILTKADLVE PKVIEEQMKA AKRLARWDEI VVLSAKTGKN VSGFEEAVAT WLPEGPKWFP
DDMDTDQPLE VIVAEFIREK ILRSFRDEVP HSIGVVTEDM QYERKKDLYK IYATIYVERD
SQKGIIIGKG GQAIKQIGIE ARKDLEQLLG CGVYLDLNVK IKKNWRRDLN QIRRFGYGEG
I