| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_12950 |
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| Symbol | |
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| ID | 8395186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 1485435 |
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| End bp | 1486472 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644986051 |
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| Product | branched-chain amino acid aminotransferase |
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| Protein accession | YP_003143671 |
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| Protein GI | 257063999 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01123] branched-chain amino acid aminotransferase, group II |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.765699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.148306 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGAAGA AAGACCTTGA CTGGGGCAAC CTCGGCTTCG GCTACATGAA GACCGATTAC
AGCTACGTGT GCAACTACAA GAACGGCGCA TGGGAGGAAG GCGGCCTGAC CACCGACCAC
ACCGTGCAGC TGAGCGAATG CGCAGGCATT CTGCATTACT GCCAGGAGTG CTTCGAGGGC
CTGAAGGCCT ACACCACCGC CAACGGCGAC ATCGTGTGCT TCCGCCCCGA CCTGAACGCT
GCCCGCATGG CCGATTCCGC ACGCCGCCTG GTCATGCCTC CGTTCCCTGA GGACAAGTTC
GTCGAGGCCG TCAAGATGGT CGTCGAAGCC AACGCCGCAT GGGTCCCGCC CTTCGGCTCC
GGCGCAGCCC TGTACGTGCG TCCGCTGATG TTCGCCACCG GCGAGGTCAT CGGCGTGAAG
CCTGCTGACG AGTACCAGTT CCGCATCCTG GTCACCCCCG TGGGCCCCTA CTTCAAGGGC
GGCGACACCG CCATCACCAT CACCGTGGCC GATTACGACC GCGCCGCTCC CCATGGCACC
GGCAACATCA AGGCTGGCCT GAACTACGCC ATGAGCCTGT ACCCCTATGA GCAGGCCCAC
AAGAACGGCT ATGCCGAGAA CCTGTATCTG GACTCCCAGA CCCGCACCTA TGTCGAGGAG
ACCGGCGGCG CCAACGTGCT GCTGGTGGCC AAGGACGGCA CCCTGGTCGT TCCGCAGTCC
CACACCGATT CCATCCTGCC CTCCATCACC CGTCGCTCGC TGGTCGTGGT AGCCAGGGAC
ATCCTGGGAA TGAACGTCGT CGAACGCCCG GTCAAGTTCG AGGAGATCAC CAACGGCGAT
TTCGTCGAGT GCGGCCTGTG CGGCACCGCT GCGGTCATCT CCCCCGTCGG CCACATCAAG
GCCGAGGGTG TGGACGTCAC CTTCGTCGAC GGCGCCGAAT CCTCCGGTCC CGTCATGGCC
AAGCTCCGTG GCACGCTCAC CCAGATTCAG TCTGGCGACA TCGAAGGCCC CGAAGGCTGG
GTCTGCAAGA TCTGCTAG
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| Protein sequence | MEKKDLDWGN LGFGYMKTDY SYVCNYKNGA WEEGGLTTDH TVQLSECAGI LHYCQECFEG
LKAYTTANGD IVCFRPDLNA ARMADSARRL VMPPFPEDKF VEAVKMVVEA NAAWVPPFGS
GAALYVRPLM FATGEVIGVK PADEYQFRIL VTPVGPYFKG GDTAITITVA DYDRAAPHGT
GNIKAGLNYA MSLYPYEQAH KNGYAENLYL DSQTRTYVEE TGGANVLLVA KDGTLVVPQS
HTDSILPSIT RRSLVVVARD ILGMNVVERP VKFEEITNGD FVECGLCGTA AVISPVGHIK
AEGVDVTFVD GAESSGPVMA KLRGTLTQIQ SGDIEGPEGW VCKIC
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