Gene Shel_12820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_12820 
Symbol 
ID8395173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1469047 
End bp1469886 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content64% 
IMG OID644986038 
ProductABC-type cobalt transport system, ATPase component 
Protein accessionYP_003143658 
Protein GI257063986 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATAGAGT TCAACGAGTT CTCGTTTCGA TACCGCGAAG GCGCGCGGCC GGTGGTGCAA 
GACATCAACC TGTCCATCCC GGACGGAGCC TTCGTAGGCA TCACCGGCGC TGCAGGCTCA
GGCAAATCCA CCCTGACCTA CGCCATGAAC GGCATCATCC CGCACTGCTA CCCCGGCGAT
TTCTACGGTT CGGTCACGGT GGACGGCCTG GACACCTGCG ACACTGGCCT GACCGACCTC
TCGCAGCTGG TGGGAAGCGT CTGCCAGGAT ATCGACAGCC AGATCATCTC GCCCATCGTT
GAGGACGAGG TTCTGTACGG CATCGAGAAC TTCGGCGTGC CCCGCGACGA AATCGAGGGG
CGCCTGACGG AAGCCCTCGA GGACATGGGC ATCGCCGACC TGCGGGAACG CACCATCGCG
AGCTTGTCCG GCGGCCAGAA GCAGAAGGTG GCCATTGCGT CGGTGCTGGC CATGAAGCCG
AAGGTGCTGG TGCTGGACGA GCCCACCGCA GAGCTCGACC CTGCAAGCTC GCTCAGCGTG
TTCGAGCTGC TTTCCCGCTA CGCCCGCGAG CACGGCACCA CCGTCGTGGT CGTCGAGCAG
AAGATCGCGT TGCTGTCGCA GTTCGCCGAC ATGCTGGTCA TTGTGGACGA CGGCAGAATT
CGGTTCGCCG ACGCGCCCGC CAAGGTGCTC GAGCACAGCG ACGAGCTGCT GGAAATCGGC
GTGAACTGCC CGCGTTCCAC CACCCTTATG AACCGCCTGG CAGCGCGCGG CGTGTACCAG
GGCCCCGTGT GCCGCAACGT GGAAGAGGCC AGCTTGGCCA TCGGGAAGGT GATCGCATGA
 
Protein sequence
MIEFNEFSFR YREGARPVVQ DINLSIPDGA FVGITGAAGS GKSTLTYAMN GIIPHCYPGD 
FYGSVTVDGL DTCDTGLTDL SQLVGSVCQD IDSQIISPIV EDEVLYGIEN FGVPRDEIEG
RLTEALEDMG IADLRERTIA SLSGGQKQKV AIASVLAMKP KVLVLDEPTA ELDPASSLSV
FELLSRYARE HGTTVVVVEQ KIALLSQFAD MLVIVDDGRI RFADAPAKVL EHSDELLEIG
VNCPRSTTLM NRLAARGVYQ GPVCRNVEEA SLAIGKVIA