Gene Shel_12810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_12810 
Symbol 
ID8395172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1468208 
End bp1469050 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content62% 
IMG OID644986037 
ProductABC-type cobalt transport system, ATPase component 
Protein accessionYP_003143657 
Protein GI257063985 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGT TCCAGCACGT GAGCGCCTCC TACGACGAGC AGATTCAGAT TCTGCGCGAC 
GTGAGCTTCA CCATCCAAGA CGGCGATTTC GTGGCGTTCG TCGGCACAAA CGGCGCCGGC
AAATCCACCA CCATGCGCCT GATGAACGGC CTGCTCAAAC CCGAATCGGG GACGGTTTTG
ATCGACGGCG TGCCCACCAC GGAGCTGCGC ACATCCGAAC TTGCGCGCCG CGTGGGTTTC
CTGTTCCAAA ACCCCGACAA CCAGATCTGC TGCAACACCG TGCGCGAGGA GCTGCTGTTC
GGGTTCAAGG CCACGGGGGC CGACATGGCC CAGGCCGAAC AGCGTGTCGA CCGCGTGATC
GAGCAGTTCG CCTTCAACCC CGACGACGAC CCCTTCATGC TGAACCGAGG CACCCGCCAG
CTTCTGGCGC TAGCCTCGGT CATCGTGATG GAGCCGCACG TGGTGGTGCT CGACGAACCG
ACTACCGGCC TGGACTTCCG CGAGTGCATC AAGGTGATGG ACATCATCCG CGGGTTGCAT
GAGCGCGGCA CCACCATCGT CATGGTGTGC CACGACATGG AGGTCGTGGG CGACTTCGCG
AAAAGCGTCA TCGTCATGAG CGCCGGCAAG GTTGTCGACC AGGGCGAGAC GTTCGCCATA
CTGCGCAACC GAGAAACCCT TGCGAAGGCG TCGCTCATCC CACCGCAGAT TGTGGACATT
TCCATGGGGC TGTCGATCAT GCATCCCGAA CTGGCCGCCA CGCCCATCGC CCAGGCCAAC
GACCTGCGCT CAATGGAAAG CGCCGTTCTG AACGCCGCGC AAGGAGGCGC GAACCGTGAA
TAA
 
Protein sequence
MIEFQHVSAS YDEQIQILRD VSFTIQDGDF VAFVGTNGAG KSTTMRLMNG LLKPESGTVL 
IDGVPTTELR TSELARRVGF LFQNPDNQIC CNTVREELLF GFKATGADMA QAEQRVDRVI
EQFAFNPDDD PFMLNRGTRQ LLALASVIVM EPHVVVLDEP TTGLDFRECI KVMDIIRGLH
ERGTTIVMVC HDMEVVGDFA KSVIVMSAGK VVDQGETFAI LRNRETLAKA SLIPPQIVDI
SMGLSIMHPE LAATPIAQAN DLRSMESAVL NAAQGGANRE