Gene Shel_12800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_12800 
Symbol 
ID8395171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1467445 
End bp1468215 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content60% 
IMG OID644986036 
ProductABC-type cobalt transport system, permease component CbiQ 
Protein accessionYP_003143656 
Protein GI257063984 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATAAAT TCCTCGAGTA CGTGCCGGGC GACAGCCTGC TGCACACTAT GAACCCCATC 
GCGAAACTCG GCGTGGCCGT GATGTTCGAC ATCGCCTGCT TTTCCACCTC CAACCTGCCG
TTTTTGCTGT GCATGCTGGT GTTGGCGCTT GCCATGGCAG CCAGCTGCGG CATGACGAGG
CAGACGTTCG GATTGATGAA GGCGGTGCTC GCTTTCTCGC TCATCCTGGC CGTGATTCTT
ATCCTAACCA CACCGAAGGG CACGTCGCTG GTCGAGCTGC CGTGGGGATT CATCGGCACC
GGCAGCCTGA TGGCCGCACT CGTGACCATC GTGCGACTGG AGGCCGCCGC CATCCCGCTG
TTCCTGACGT TCTACGTGAC AAAGATCTCG GATTTGTCCA ACGCCGTGGT GAAAGTACTG
GGCGTGCCCT ATAAATACGC ATTCACGTTC ACTTCCACCG TGCATTTCAT ACCGGTGTTC
ATGAATGACA TGAGCGGCAT CATGGAGGCT CAGACCGCCC GCGGCATCGA ATTCGACAAA
GGCGGCCTGC TGCACAAAGT GCGTCTGATG ATTCCGCTGT GCGTGCCGCT GCTGGTCAGC
TCCGTTCGCA AGACAAACAG CGCCGCCATT GCCGCCGAGG TCCGCGGATT CAACCTGCGC
ACCCGCCAGA GCGGTTTCAA GGAGTACCCC TTCTCTCCCG TCGACATCGC CGCCCTCGTG
CTGGCCGTGA TCTTGCTCGT AGCCGCCATC GCCCTGAACA TCCTGTTCTA G
 
Protein sequence
MNKFLEYVPG DSLLHTMNPI AKLGVAVMFD IACFSTSNLP FLLCMLVLAL AMAASCGMTR 
QTFGLMKAVL AFSLILAVIL ILTTPKGTSL VELPWGFIGT GSLMAALVTI VRLEAAAIPL
FLTFYVTKIS DLSNAVVKVL GVPYKYAFTF TSTVHFIPVF MNDMSGIMEA QTARGIEFDK
GGLLHKVRLM IPLCVPLLVS SVRKTNSAAI AAEVRGFNLR TRQSGFKEYP FSPVDIAALV
LAVILLVAAI ALNILF