| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_12790 |
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| Symbol | |
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| ID | 8395170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1466602 |
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| End bp | 1467327 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644986035 |
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| Product | transposase |
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| Protein accession | YP_003143655 |
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| Protein GI | 257063983 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1943] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGATT CCGACATCTA TCATGTGGTG GCTCGCGGCG TCGGCCGTTG CATCATTTTC
GAAGACGACG CCGATCGCAA GAAATACCTG GGAATACTTG ATACAACCCG CGAGAAGCAT
CAGCTTGCGC TGCTCGCCTG GTGTCTTATG GACAATCATG TCCACTTGCT CATAAAAGGC
GATCTGACCG CCCTGTCAGA CGGTATGCGA GCGCTCGATT CGGAATATGC GCAGTATTTC
AACCTTCGAC ATGGGCGCGT CGGGCACCTG TTCCAGGGCC GTTTCAAAAG CGAAACGGTT
GATACCGACC AATATTTTCT TACGGTGCTC CGCTACATCC ATCAAAACCC GGTGAAGGCT
GGCATGACTT CGACTTGCGA TTATACGTGG AGCAGTTATC AGGAATACAT CGGCGAGCCT
ATGCGGACGG ATACAGGCAT GGCGCTTTCG ATGCTTGACG GCGTCGATGG TTTCGTCGAA
TTCCATCGGC AAGATGACCC TGGTGCCGGG TGTATCGACG TGAATACCGG AAGATGCCGT
TACGAGGGCG AAGCGGCGAT CGTGGTCGCG AAGGAGGTTC TTGCGCCCGT GCGAATCGAA
GAGGTGGCCG GTATGCCGCG GGAAGAAAGG AACGAGGCGC TCAAAACCCT GAAGGCAGCG
CGGCTGTCTC TACGTCAAAT AGAACGGTTG ACGGGGGTTT CGAAAACCAC CGTTGCGAAA
GCTTAG
|
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| Protein sequence | MSDSDIYHVV ARGVGRCIIF EDDADRKKYL GILDTTREKH QLALLAWCLM DNHVHLLIKG
DLTALSDGMR ALDSEYAQYF NLRHGRVGHL FQGRFKSETV DTDQYFLTVL RYIHQNPVKA
GMTSTCDYTW SSYQEYIGEP MRTDTGMALS MLDGVDGFVE FHRQDDPGAG CIDVNTGRCR
YEGEAAIVVA KEVLAPVRIE EVAGMPREER NEALKTLKAA RLSLRQIERL TGVSKTTVAK
A
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