Gene Shel_12600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_12600 
Symbol 
ID8395151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1447134 
End bp1448441 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content52% 
IMG OID644986016 
Producthypothetical protein 
Protein accessionYP_003143636 
Protein GI257063964 
COG category[R] General function prediction only 
COG ID[COG1106] Predicted ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAATCA GCTTTGAGGT CGAGAATTAC CGTTCCATAA AATACCCAGT AGTTCTGCAA 
ATGACCGCGG TGAACTATTA CAAGGAGTCA TCCGAACAGC TCATCGATGC AGAGTTGCCT
GGATTGTCCG GCCTCCGCTT CCTTCGGTCG GCAGCTATTT TCGGGCCGAA CGCATCGGGA
AAGACCGCAA TATGGCGGGC TCTTGCCACG ATGAAAGACA TCGTGCTCAA CTCCGCTTCG
TATATGGCTA GCACTGCGTT CAACCATGCC CCGTTTAGGT TGGATCCCGA AATGCTTGAC
GAGCCCACAC GCTTTACTGT GGTGTTCACA TCCGGCATGG ATTCAATACG ATATGAGTAC
AGCTTTGCAT ACACGGAAAA TGCCATTATA GAAGAGGAGC TTTGTGCGTA TCCCAAGGGG
CACAGGCAAA CATGGTTCAG GCGTGCAATG GAAGACGGTG CTACGAATAT CAAGGGGTCT
GGCTATCTTA AGGTGCCCGC GGCCGTGAAA CCTTTCCTCA ACGACAACAT GCTGCTGCTT
TCTCTTCTTG CAAACTTCCC GAATGCGGAA AGCTATAAGC GCGTTGCTCC CGTTGTCGAC
TGGTTCATCA ACGGTTTGGA TATGTATTCG CGGGCCCCCG AGAGTCTAAA CGACTTCCCA
TTCTCTGGTG AGATTGTTAG CGGAGAACGC GGCACAGAGG GCATGCGCCG GTTCATTCAA
AACATGATGC GCCAGGCTGA TGTCGGAATA TATCGCGCCG AGGTTGAAAG GCGCCCCATG
CCAGAGGAAA TGCGTGCGAT TCTGGAGCAT ATCTCTCCCG TGCAAGGCGG GATTGACGAC
GTCGTGAAGA CGGTTGTCTT CCAACACGAG AACGCAGGAA AAAAGATGAA ACTCGAAATG
GAGGATGAAT CCGACGGAAC GAAGCAGCTT TTCGGACTCA GCGGCCATAT CGCACAGGCA
TTGGAGAGCG GATCGACCTT GTTCGTCGAT GAAGTTGACG CATCTCTTCA TCCTGTCCTC
GTGACTGAGG TGATTAGGAC GTTCTTGCAC CCCGAAAGCA ACCCGAATGG GGCTCAGCTC
ATATTCACCG CGCATAACCC GTGTCTGTTA GAGAATGGAT TGTTGAGGCG CGATCAAATC
TGGTTTACGG AGAAGGATAA GGAGGGGGCC ACCGCACTAT ACCCGCTATC AGACTTCAGT
CCCCGTAAGG AAGAGACCGT GATTGCCGGG TATCTGAATG GCAGATACTC CGCTATCCCC
GTTATTCCTG AATGCTTCGG CAGATGCGAT GGTTTCGATA TGGAGTGA
 
Protein sequence
MLISFEVENY RSIKYPVVLQ MTAVNYYKES SEQLIDAELP GLSGLRFLRS AAIFGPNASG 
KTAIWRALAT MKDIVLNSAS YMASTAFNHA PFRLDPEMLD EPTRFTVVFT SGMDSIRYEY
SFAYTENAII EEELCAYPKG HRQTWFRRAM EDGATNIKGS GYLKVPAAVK PFLNDNMLLL
SLLANFPNAE SYKRVAPVVD WFINGLDMYS RAPESLNDFP FSGEIVSGER GTEGMRRFIQ
NMMRQADVGI YRAEVERRPM PEEMRAILEH ISPVQGGIDD VVKTVVFQHE NAGKKMKLEM
EDESDGTKQL FGLSGHIAQA LESGSTLFVD EVDASLHPVL VTEVIRTFLH PESNPNGAQL
IFTAHNPCLL ENGLLRRDQI WFTEKDKEGA TALYPLSDFS PRKEETVIAG YLNGRYSAIP
VIPECFGRCD GFDME