Gene Shel_12560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_12560 
Symbol 
ID8395147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1444387 
End bp1445352 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content59% 
IMG OID644986012 
Productcarbamate kinase 
Protein accessionYP_003143632 
Protein GI257063960 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0549] Carbamate kinase 
TIGRFAM ID[TIGR00746] carbamate kinase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTTC GCATTAATTC CGACAAACGC GTGGTCATTG CGCTGGGCGG TAACGCATTG 
GGCGACACAC CCGAGGAACA GATTCAGCGT GTGCGTGAGG TGGGCCCGAA GCTGTTGGAT
CTGATCGGCC AGGGCAACGA GATTATCATC ACGCATGGCA ACGGGCCGCA GGTGGGCATG
ATTCAGAAAG CGTTCACCTA TGCGCACCAA GTAAACGACG GCATTCCCAT GATGGACCTG
CCCGAGTGTG GAGCCATGAG CCAGGGCTAC ATCGGATACC ATCTGCAACA GGCTATCGGT
GTGGCGCTGC ATAAAGCGTA TAAGCGCTGG CACGTGGCAA GCGTCATCAC CCAGACCGAG
GTGGATTCCG AGGATCCGGC ATTTCGGAAT CCTACCAAGC CCATCGGTGC GTTTTTGACT
AAGGATCAGG CCGAAGAGGA AATGGCCAAG CATCCCGACC AGAAGTTCGT TGAGGATTCG
GGACGTGGCT GGCGCCGCGT GGTCGCGAGC CCCATACCGC GCAAGATTGT GGAAGCACCC
AGTATTCTAA ACCTGCTGAA TGACGAGTTC ATCGTGGTTT GCTCGGGCGG CGGTGGCGTC
CCGGTGGTGC GCGACTTCAG CGATAAGGGC GCGTACAAGG GTGTGGCAGC TGTTATCGAC
AAGGATCTGG GCGGTGAGCT CCTGGCGGAG GACTGCCTGG CCGACGTGCT CATTCTGCTG
ACGGCAGTCG ACCACGTGGC TCTCAACTTC GGAAAGCCTG ACCAGATTGA CCTGGAGGAC
CTGTCAGTCG AGGACGCCGA ACGCTATATT GCGGAAGGCC AGTTTGGCAA GGGCAGCATG
GAACCCAAAG TGATGGCGGG CGTGAAGTTC GCGAAGAGCC GATCGGGCCG CGTGTGCATC
ATCGGCAGCT TGGACAAGGC CGCCGACGCC ATAGCTGGCA AAAGCGGTAC CCGCATCCAC
GCATAG
 
Protein sequence
MSVRINSDKR VVIALGGNAL GDTPEEQIQR VREVGPKLLD LIGQGNEIII THGNGPQVGM 
IQKAFTYAHQ VNDGIPMMDL PECGAMSQGY IGYHLQQAIG VALHKAYKRW HVASVITQTE
VDSEDPAFRN PTKPIGAFLT KDQAEEEMAK HPDQKFVEDS GRGWRRVVAS PIPRKIVEAP
SILNLLNDEF IVVCSGGGGV PVVRDFSDKG AYKGVAAVID KDLGGELLAE DCLADVLILL
TAVDHVALNF GKPDQIDLED LSVEDAERYI AEGQFGKGSM EPKVMAGVKF AKSRSGRVCI
IGSLDKAADA IAGKSGTRIH A