| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_12550 |
|---|
| Symbol | |
|---|
| ID | 8395146 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 1442760 |
|---|
| End bp | 1444202 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644986011 |
|---|
| Product | Na+/H+ antiporter |
|---|
| Protein accession | YP_003143631 |
|---|
| Protein GI | 257063959 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1757] Na+/H+ antiporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.507606 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTTG GCGCTTTGTC GGTGTTGCCT GTACTCATCG CCATTATCGG CTCCCTTATT
ACGCGACGTC CATTCGAATG TCTGCTGATG GGTTCGCTCA TCGGGTGCAT CATCATGTAC
GGCGGCGGCT TTCTGCCCGA GTGGACGAAC ATGCTGCAGA CCACCATTGC CGACAACGTT
TGGATCATTG CAGTGTGCGG CCTGTTCGGA AGCTTGATTG CGCTGCTCAC GGCCGCGCGC
GGGACCGAAG GCTTCTCGGC GTGGGCAACG AAGTTCTGCA AGACCCGCCG CACCACCCGC
GTTGTCACGT TCATCCTGGG CGTGGTCATC TTCGTGGACG ACTATCTGAA CATGCTCACG
GTTGGCAACT GCATGCGTCC CGTGAACGAC AAGCTGAAGA TGCCGCGCGA ATCGCTGGCG
TTCATCACCG GCGCAACCGG CACCCCAGTG TGCATGCTTC TGCCGTTCTC CACGTGGGCA
GCGTTCTACA TCGCCCTGTT CCAACAGCAG GCCGAGGTGC AGGCCATGAA CTTTAGCAGC
AGCATCGACC TGTTCATGCA CTTCATTCCC TATAACTTCT TCTCCATCAC CATGGTTCTC
ATCACCTTCC TGTTCGCGCT GGGAATCATC CCTCCCATCG GGCCCATGAA GAAGGCCTAC
AAGCGCGTCG AGGACGGCGG AACGCCGTGG TGCGAGAAGT CGGCGGAAAT CAACCAGGAG
GACGCCGAGG CTTTGGGCAT CGCCGCAAGG CCGACCATGG CCGAGTCCGT GGAGAAAGCC
GAGGCTGAGT TGGAAGCTGC AGCTCAGGCG CCTGCGGACA GCCACGGGGA GGGCAAGCTC
ATCGACTTCG CGATTCCCAT GCTGGCGCTG ATCGTCGTTA CGTTCGTGCA GGACATTCTG
GTCGGTGTCG TGGTGGCTTT GGCCGTGTGC CTGGTGCAGT ACCTCATCCG CAAGAAGATG
ACTATCGCCG AGTGGACCGA GAAACTCTAC GAAGGCTTCG CGGACATGAT CCCCACGCTC
ATCTGTCTTA TGGCGGCGTT CATGGTGGCT GGCACGTCGG GCGCTATGGG CCTCACGCAG
TGGGTCATCG ACGTTGCCGC CGGGTTCCCG CTGCCTGCGC TGTTCCCAGC CATCGTCTTC
GTTGCGGTGG GCTTCATCAC CTTCGCAACC GGGTCGTTCT GGGGCACGTC CACCATCGTC
ACGCCGATTC TTCTGCCGCT GGCTGCGGCC ATGAGCGCAC CGATGATGCT GACCATGGGC
GCCATCTTGT GCGGATGCAC CATGGGCACG CAGGTATGCT TCTTCTCCGA CGGCAACATG
CTCATCGCCA CTTCGGTAAA GAACGACCTC ATGGAAAACT ACTTTGCCAC CTTGCCGTAC
CTGGGCATGG CCATCGGGCT TACGCTGGTG TGTCTTATCA TAGGCGGCTT CGTGATGGCG
TAA
|
|---|
| Protein sequence | MELGALSVLP VLIAIIGSLI TRRPFECLLM GSLIGCIIMY GGGFLPEWTN MLQTTIADNV
WIIAVCGLFG SLIALLTAAR GTEGFSAWAT KFCKTRRTTR VVTFILGVVI FVDDYLNMLT
VGNCMRPVND KLKMPRESLA FITGATGTPV CMLLPFSTWA AFYIALFQQQ AEVQAMNFSS
SIDLFMHFIP YNFFSITMVL ITFLFALGII PPIGPMKKAY KRVEDGGTPW CEKSAEINQE
DAEALGIAAR PTMAESVEKA EAELEAAAQA PADSHGEGKL IDFAIPMLAL IVVTFVQDIL
VGVVVALAVC LVQYLIRKKM TIAEWTEKLY EGFADMIPTL ICLMAAFMVA GTSGAMGLTQ
WVIDVAAGFP LPALFPAIVF VAVGFITFAT GSFWGTSTIV TPILLPLAAA MSAPMMLTMG
AILCGCTMGT QVCFFSDGNM LIATSVKNDL MENYFATLPY LGMAIGLTLV CLIIGGFVMA
|
|---|
| |