Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_12440 |
Symbol | |
ID | 8395135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1430428 |
End bp | 1431744 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644986001 |
Product | hypothetical protein |
Protein accession | YP_003143621 |
Protein GI | 257063949 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.192453 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATCA GGAAGCTAAT TGTTGTTGCG ATAGTGGTAT TGTTTGGACT GTCTTTAGTT GGCTGTGCTT CGTCTGAAGG CGTTTCGTCG GGCGCATCGG GGAACGTCCA GGAGCCACCA TCTTTAAAGT CGTCTGATAA CTCGGCAGCG GATTCTGAGA TAGACATAGC TAATGCAATT GAGTTTGAAT CGGAAGGCGA GCGTGTCGAT GACTCCAAAT TGGACACGGT GGATACCTTC AATGGTGTCA CAGTGCCTCT GTGCAGCAAG TGGGAGCATT CTACTTATGA TTCTGAATTA GATATACAGC CTCACGAAAT GACGTACAGA ATAATTCCCG AGTCTGAATC GTCCATCGAT GGTTCAGGCA CGCTAATCAC CGAAACGTAT GCTCGCGGCG AAACGAAAGA TACCGCCACT TTCGCTCTCT ATACTAGTGA GTTTATAGAT TATGGTGACA CTTTTTATGA TGAGGGTGAA TGGCGTATTG ATGACTGCAC GTATCGTGTT ATGTCCGCGT ATAATCCTAT CATGAATTCC TATTCATCAT ATCTGATTGG CTATGCGGAT AATGGCCTTG GGTTTGCAAC AAGGTTTTAT CTACACGGCA GGTACGTTGG CTCTGCCAAT ATCGGACTTC GTAATGAAAT GTTTAAACAA ATAAGGTTCG ATAGTTCGCA AGTGGATGAA GGGCTGTGCA GCTTGCCATC GAAGGCAGAT ACCGAGTTCG ATTCGGATTT CGACATGACA ACGGCAGAGA GCAACGATGA CTTCATTGAA GCCCTTCAAA GCCTGGGGCA GTTTGAGCCG ACTAATGCAT CGGGCTCGGG CGATGATGTG GTCGATGTGC CTTGCGTACC TTCTCCCTGT ATTATGAGCA TAAGGCATGA TGGATCCAGT AACTTTGTTG TGGAGAGCTA TACAGATTCC GGCGAGAGCG TCGACTTGCT TGTGAACACG ATTGGCCCAT ACGAAGGTAC CGTGACTTCA TATATGAACT TTGAAGAGAC GAACATGCTG GAAATACATG CTGATGGAAA TTGGGATATT TGTTTTGCGC CACTTACGGA TATGGAGAAG GCAGAAAACG GATCAGTATT CCACGGAGAT GATGTTGTCT ATATCGATGA AGCGTCTATT TCTAAGGTGC ATTTTAGTCA CTCTGGAGAA AGTAATTTCT CTGTTTGGGC TATTGGAATG GACGACTTCG ATCTTCTCGT GAACGAAATT GGCCCCTATG AAGGCACAGT GGTCTGGAAT GAAAGCGGGT CGTTTTTTAT TGTTCATGCG GATGGCGATT GGTCGATAAG CTGGTAG
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Protein sequence | MNIRKLIVVA IVVLFGLSLV GCASSEGVSS GASGNVQEPP SLKSSDNSAA DSEIDIANAI EFESEGERVD DSKLDTVDTF NGVTVPLCSK WEHSTYDSEL DIQPHEMTYR IIPESESSID GSGTLITETY ARGETKDTAT FALYTSEFID YGDTFYDEGE WRIDDCTYRV MSAYNPIMNS YSSYLIGYAD NGLGFATRFY LHGRYVGSAN IGLRNEMFKQ IRFDSSQVDE GLCSLPSKAD TEFDSDFDMT TAESNDDFIE ALQSLGQFEP TNASGSGDDV VDVPCVPSPC IMSIRHDGSS NFVVESYTDS GESVDLLVNT IGPYEGTVTS YMNFEETNML EIHADGNWDI CFAPLTDMEK AENGSVFHGD DVVYIDEASI SKVHFSHSGE SNFSVWAIGM DDFDLLVNEI GPYEGTVVWN ESGSFFIVHA DGDWSISW
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