Gene Shel_12440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_12440 
Symbol 
ID8395135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1430428 
End bp1431744 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content46% 
IMG OID644986001 
Producthypothetical protein 
Protein accessionYP_003143621 
Protein GI257063949 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.192453 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCA GGAAGCTAAT TGTTGTTGCG ATAGTGGTAT TGTTTGGACT GTCTTTAGTT 
GGCTGTGCTT CGTCTGAAGG CGTTTCGTCG GGCGCATCGG GGAACGTCCA GGAGCCACCA
TCTTTAAAGT CGTCTGATAA CTCGGCAGCG GATTCTGAGA TAGACATAGC TAATGCAATT
GAGTTTGAAT CGGAAGGCGA GCGTGTCGAT GACTCCAAAT TGGACACGGT GGATACCTTC
AATGGTGTCA CAGTGCCTCT GTGCAGCAAG TGGGAGCATT CTACTTATGA TTCTGAATTA
GATATACAGC CTCACGAAAT GACGTACAGA ATAATTCCCG AGTCTGAATC GTCCATCGAT
GGTTCAGGCA CGCTAATCAC CGAAACGTAT GCTCGCGGCG AAACGAAAGA TACCGCCACT
TTCGCTCTCT ATACTAGTGA GTTTATAGAT TATGGTGACA CTTTTTATGA TGAGGGTGAA
TGGCGTATTG ATGACTGCAC GTATCGTGTT ATGTCCGCGT ATAATCCTAT CATGAATTCC
TATTCATCAT ATCTGATTGG CTATGCGGAT AATGGCCTTG GGTTTGCAAC AAGGTTTTAT
CTACACGGCA GGTACGTTGG CTCTGCCAAT ATCGGACTTC GTAATGAAAT GTTTAAACAA
ATAAGGTTCG ATAGTTCGCA AGTGGATGAA GGGCTGTGCA GCTTGCCATC GAAGGCAGAT
ACCGAGTTCG ATTCGGATTT CGACATGACA ACGGCAGAGA GCAACGATGA CTTCATTGAA
GCCCTTCAAA GCCTGGGGCA GTTTGAGCCG ACTAATGCAT CGGGCTCGGG CGATGATGTG
GTCGATGTGC CTTGCGTACC TTCTCCCTGT ATTATGAGCA TAAGGCATGA TGGATCCAGT
AACTTTGTTG TGGAGAGCTA TACAGATTCC GGCGAGAGCG TCGACTTGCT TGTGAACACG
ATTGGCCCAT ACGAAGGTAC CGTGACTTCA TATATGAACT TTGAAGAGAC GAACATGCTG
GAAATACATG CTGATGGAAA TTGGGATATT TGTTTTGCGC CACTTACGGA TATGGAGAAG
GCAGAAAACG GATCAGTATT CCACGGAGAT GATGTTGTCT ATATCGATGA AGCGTCTATT
TCTAAGGTGC ATTTTAGTCA CTCTGGAGAA AGTAATTTCT CTGTTTGGGC TATTGGAATG
GACGACTTCG ATCTTCTCGT GAACGAAATT GGCCCCTATG AAGGCACAGT GGTCTGGAAT
GAAAGCGGGT CGTTTTTTAT TGTTCATGCG GATGGCGATT GGTCGATAAG CTGGTAG
 
Protein sequence
MNIRKLIVVA IVVLFGLSLV GCASSEGVSS GASGNVQEPP SLKSSDNSAA DSEIDIANAI 
EFESEGERVD DSKLDTVDTF NGVTVPLCSK WEHSTYDSEL DIQPHEMTYR IIPESESSID
GSGTLITETY ARGETKDTAT FALYTSEFID YGDTFYDEGE WRIDDCTYRV MSAYNPIMNS
YSSYLIGYAD NGLGFATRFY LHGRYVGSAN IGLRNEMFKQ IRFDSSQVDE GLCSLPSKAD
TEFDSDFDMT TAESNDDFIE ALQSLGQFEP TNASGSGDDV VDVPCVPSPC IMSIRHDGSS
NFVVESYTDS GESVDLLVNT IGPYEGTVTS YMNFEETNML EIHADGNWDI CFAPLTDMEK
AENGSVFHGD DVVYIDEASI SKVHFSHSGE SNFSVWAIGM DDFDLLVNEI GPYEGTVVWN
ESGSFFIVHA DGDWSISW