| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_12410 |
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| Symbol | |
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| ID | 8395132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1426686 |
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| End bp | 1428497 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644985998 |
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| Product | CTP:phosphocholine cytidylyltransferase |
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| Protein accession | YP_003143618 |
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| Protein GI | 257063946 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4750] CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTACGT ATAAGGAATT CGAAGTCGTA AAGGCGCTGC TCGACGGTAC CGTCAAAGAC
GCAGAGCAGA TTTACAAGCA GACGCGACAC TATGTGTTTA AGGACGCTGA CGAGGTGTCC
GAGCTGATGC GCGGGCTTGA AGCCAAGGGT TATCTCGCCG ATGGCAAGCT GACTGAATCC
GGAATGGCCG AAATCGAGCC CTGCAAGGTT CGCAATGCGG TCATCCTTGC TGCTGGCGGT
GCGGACATTA CTGCAAAGTC TGTTTACAAC ATGCCCAAGG GTCTGTTCAT GAAAGACGGC
GAGACGCTTA TCGAACGTCA GATCCGCCAG TTGAAGGAAG TCGGCGTCGA CGACATTACG
GTCGTGATTG CTTACAAGCA AGAGCTGTAC TTCTTCCTGC AGGACAAATG GGGTGTGACA
CTTGAAATCA ACCCTGATTT GAAGAAGAAC AACATCCATT CGCTGTACAC GGTTCGCGAC
CGTTTGGGCG GAACCTACAT CTGCAACTGC GACAATTACT TCGAAGAGAA TCCATTCTCT
TCCTACGAAT ACAATTCCTT CCACGCAACG GTGTTCAAGG AGGATGCTAC CGATGAGCTG
GTCGTTCGTA CGAACGAAAG CGGTCGAATC CTGAAGGTCG AAAGCTGTGC GAAAAGTGGT
GAATGCATCT ACGGGCATGC TTATATGGAC CCCGCGTTTG CAGCTCGCTT CGTCCGCTTT
ATGGAAGAAG AGGAGCCTGA CTTCCGCATC TCCCATTTGT TCTGGGAGGA ATTCGTTTCG
CGTCATGTGG ACGACTTGGA CATGTACGCG CACGAATACC CGGCCGACAT GGTGCTCGAA
TTCGACCACA TCCAGGAGAT CCAGAACATT GAAGGCCTGT TCCTTGGCAA CGTGAGCGGT
CGCATCAACT CGAAGATATG CGAAGTGCTG GATTGCACCG AGGATGAGAT CGCTGATATC
GTGGTACTTG AAAAGGGTCT TTCGAACATC TTGTTCACGT TCGTAGTTCG CGGCGAGCGC
TACATTTTCC GCTATCCTGG AGACTCCACA GCATTCTTCA TCTACCGTAA GAACGAATGC
CTTGCTCAGA AGCTGGGTGC GGCTGCCCAT GCGGATGATA CATATGTCTA CATTGACGAG
ACCGGCCTTA AGATCTCCAA GTTCCGCGAG AACTGCATCG ACCTGCACGG CGTGTACTAT
GAAGACGTCG AATTGATGAA GCGCGTGGCG AAGAAGATCC GTGCGTTCCA CGATGAGGGT
TGTGGCCTGG AGAATTGGGA AGAGTACAAC TACGACCCGA TTTATCAGAC GGAGCGCCTG
TTCAAAGAGG CATCCAAGAT GAAAGGCGAC CTGTTCAAGG TATTTGAGAA GGAATGGGCG
ATGATGCACC TTCTCCAGAA GTACGCGGAT ATGGACGGCG TCGAGCATAC GATGTGCCAC
AACGACATCA ACATCGACAA CGTGTTGTTG ACCGAGGACA CCCTCGACAT CATCGACTGG
GAGTTCGCGG GATACAACGA CCCGGGCTAT GATTTCGGAC GCGTGATTGC TGGCCTCGAT
TACGAGGTTG ACGAGCCGAA GATTGATGAC ATTCTTGAAG CCTACTTCGG ACGTCCCGCA
ACAGAGGGCG AACATCTCCA CTGGATGGCC TACTCGGCAA TACACAACTG GTATTACGTT
GGTTGGGCCT TGTACAAGGA ATCTATCGGA GAGTCGAGCC GCGACTGGAT GCTTTTCTTC
TTCAAGCAAA CCAAGAAGCT GGCTGAATGG TGTCTGCCGC GCTACGAGGC GAAATATGGA
AAGATTGACT AA
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| Protein sequence | MITYKEFEVV KALLDGTVKD AEQIYKQTRH YVFKDADEVS ELMRGLEAKG YLADGKLTES
GMAEIEPCKV RNAVILAAGG ADITAKSVYN MPKGLFMKDG ETLIERQIRQ LKEVGVDDIT
VVIAYKQELY FFLQDKWGVT LEINPDLKKN NIHSLYTVRD RLGGTYICNC DNYFEENPFS
SYEYNSFHAT VFKEDATDEL VVRTNESGRI LKVESCAKSG ECIYGHAYMD PAFAARFVRF
MEEEEPDFRI SHLFWEEFVS RHVDDLDMYA HEYPADMVLE FDHIQEIQNI EGLFLGNVSG
RINSKICEVL DCTEDEIADI VVLEKGLSNI LFTFVVRGER YIFRYPGDST AFFIYRKNEC
LAQKLGAAAH ADDTYVYIDE TGLKISKFRE NCIDLHGVYY EDVELMKRVA KKIRAFHDEG
CGLENWEEYN YDPIYQTERL FKEASKMKGD LFKVFEKEWA MMHLLQKYAD MDGVEHTMCH
NDINIDNVLL TEDTLDIIDW EFAGYNDPGY DFGRVIAGLD YEVDEPKIDD ILEAYFGRPA
TEGEHLHWMA YSAIHNWYYV GWALYKESIG ESSRDWMLFF FKQTKKLAEW CLPRYEAKYG
KID
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