| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_12330 |
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| Symbol | |
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| ID | 8395124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1418701 |
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| End bp | 1419669 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644985990 |
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| Product | LPS biosynthesis protein |
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| Protein accession | YP_003143610 |
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| Protein GI | 257063938 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3475] LPS biosynthesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.806434 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAGC TTTCTACGTT TGAAGCATTT AAGCATCTTC ATGGCAAAGG TGCCTACAAG
GTGGTTGAAG GTGACGATTT GCAAGCACTG CAAATCGTTT TGTTGGATAT GATGTTGGAT
ATTGACGCCG CATGCAAAAG AGCATGTATC GACTATATGC TATTCGCCGG AAGCTGTCTG
GGGGCATACA GGGATGGTGG GTTCATCCCT TGGGATGACG ATCTGGATAT TGCAATGGAT
CGTATGAGCT ATGAGCGTTT TTGCAAAGCC TTTAACGATG AGCTCGGTGA CGGGTACATT
CTACAAACCC CGCTCGATAC GAAAGAATAC GGATTGACGT TTGCACGCAT TCGTAAGCGT
GGAACAACTC TCAAATGTCG CGATGACCTA CTAACTGATG GCGAATGCGG GGTCTACATA
GACCTTTTTA TATGGGAGTC GGCGCCTGAT AATCCGATTC TTAGAGCGTT GCATGGATTT
GGTTCACTAG CGATAGGGTT CTTGTATTCC TGCAGGCGGT TCGCATGGTA TGGCGATACG
TATCTGAACA TGGCCCAAGG CGACGCTCAG CTATCGCGCG TATTCAAGCT GAAGAATGCC
ATTGGCAAAG TGCTTTCATT TGCAAGCATC GACGCATGGA CCCATGCTTG GTATCGTTGG
AACGCATTAT GCAAAAACGA AAAGTCGCGA TTACTGACTA TCCCCAATGC ACGTAAGAAG
TATTTCGGGG AGATTTACGA GCGGTCGGTA ATTCTTCCAA TGCGCAGACT GGATTTTGAA
GGAAAGCTTC TTATGGGGCC GAACTCCATA GAGGATTATC TGGCGCAAGC TTTCGGGGCG
GATTACATGA CTCCACCGCC TCCGGAGGCT CGTGAAAAGC ACATTGTATT TGAATTTGAT
TTGGGAACCG CTGTCGAAGA CGCAATTGCG AAACGAGATA TGACATCGGG CTTTCCCGAA
GGAGATTAA
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| Protein sequence | MNKLSTFEAF KHLHGKGAYK VVEGDDLQAL QIVLLDMMLD IDAACKRACI DYMLFAGSCL
GAYRDGGFIP WDDDLDIAMD RMSYERFCKA FNDELGDGYI LQTPLDTKEY GLTFARIRKR
GTTLKCRDDL LTDGECGVYI DLFIWESAPD NPILRALHGF GSLAIGFLYS CRRFAWYGDT
YLNMAQGDAQ LSRVFKLKNA IGKVLSFASI DAWTHAWYRW NALCKNEKSR LLTIPNARKK
YFGEIYERSV ILPMRRLDFE GKLLMGPNSI EDYLAQAFGA DYMTPPPPEA REKHIVFEFD
LGTAVEDAIA KRDMTSGFPE GD
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