Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_12310 |
Symbol | |
ID | 8395122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1416873 |
End bp | 1417655 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644985988 |
Product | hypothetical protein |
Protein accession | YP_003143608 |
Protein GI | 257063936 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTCATG AAGTCAATCG GAGGGATTTG ACGATTGTAG TTGCTACTCA CAAGCCCTAC TGGATGCCGG ATGACCCTTG CTATCTTCCC GTACAGGTAA ATGCCGGCTC TATGCAGCCG ATAAGAGGAT TTCAGCCTGA TAATGTAGGG GATAATATTT CAGAAAAGAA TCCAAATTAC TGCGAACTCA CGGCATTGTA TTGGGCCTGG AAGAACCTCG AATCGGAATA CCTGGGACTT GCCCATTACA GACGTCATTT CGCAGCACGC AGGCTTGGAG ATAAGAAATC TCGAGTTGCA AGTGGTGATC AACTTAAAAA TGCTTTGTCG CATGTCGATG TGTTGCTGCC GACGCCGCGG AATTACTTTA TTGAGACTAA CTATAGCCAA TATGTCCATG CCCACCACGA AGAAGATCTT GCCTTTACCC GGGAGATCCT GACGGAGTAT GAACCGCATC TCGTTGGTTT GTACGACGAA GTAATGAATC GCACGTACGG GCATAGGTTC AACATGTTTG TCATGAAGCG CACAGTGGCA GATGAGTGGT GCGAGTGGCT CTTTAAGGTT TTATTTGAGT TGGAGAATAG GCTGGACATC AGTAACTACA GCGCAAACGA TGCTCGAGTG TTCGGCTTCG TGAGTGAGCG GCTACTGGAT TATTGGGTCG AATCGCGAGG CATTGCATAT GTAGAGATGC CCGTGGTAAA CCTTGAGAGC CAGCACTGGT TTAAGAAAGG GGCTAGCTTC TTGGCTAGAA AGGTTGCTGG CAGTCGTGGT TAA
|
Protein sequence | MPHEVNRRDL TIVVATHKPY WMPDDPCYLP VQVNAGSMQP IRGFQPDNVG DNISEKNPNY CELTALYWAW KNLESEYLGL AHYRRHFAAR RLGDKKSRVA SGDQLKNALS HVDVLLPTPR NYFIETNYSQ YVHAHHEEDL AFTREILTEY EPHLVGLYDE VMNRTYGHRF NMFVMKRTVA DEWCEWLFKV LFELENRLDI SNYSANDARV FGFVSERLLD YWVESRGIAY VEMPVVNLES QHWFKKGASF LARKVAGSRG
|
| |