Gene Shel_12310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_12310 
Symbol 
ID8395122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1416873 
End bp1417655 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content48% 
IMG OID644985988 
Producthypothetical protein 
Protein accessionYP_003143608 
Protein GI257063936 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCATG AAGTCAATCG GAGGGATTTG ACGATTGTAG TTGCTACTCA CAAGCCCTAC 
TGGATGCCGG ATGACCCTTG CTATCTTCCC GTACAGGTAA ATGCCGGCTC TATGCAGCCG
ATAAGAGGAT TTCAGCCTGA TAATGTAGGG GATAATATTT CAGAAAAGAA TCCAAATTAC
TGCGAACTCA CGGCATTGTA TTGGGCCTGG AAGAACCTCG AATCGGAATA CCTGGGACTT
GCCCATTACA GACGTCATTT CGCAGCACGC AGGCTTGGAG ATAAGAAATC TCGAGTTGCA
AGTGGTGATC AACTTAAAAA TGCTTTGTCG CATGTCGATG TGTTGCTGCC GACGCCGCGG
AATTACTTTA TTGAGACTAA CTATAGCCAA TATGTCCATG CCCACCACGA AGAAGATCTT
GCCTTTACCC GGGAGATCCT GACGGAGTAT GAACCGCATC TCGTTGGTTT GTACGACGAA
GTAATGAATC GCACGTACGG GCATAGGTTC AACATGTTTG TCATGAAGCG CACAGTGGCA
GATGAGTGGT GCGAGTGGCT CTTTAAGGTT TTATTTGAGT TGGAGAATAG GCTGGACATC
AGTAACTACA GCGCAAACGA TGCTCGAGTG TTCGGCTTCG TGAGTGAGCG GCTACTGGAT
TATTGGGTCG AATCGCGAGG CATTGCATAT GTAGAGATGC CCGTGGTAAA CCTTGAGAGC
CAGCACTGGT TTAAGAAAGG GGCTAGCTTC TTGGCTAGAA AGGTTGCTGG CAGTCGTGGT
TAA
 
Protein sequence
MPHEVNRRDL TIVVATHKPY WMPDDPCYLP VQVNAGSMQP IRGFQPDNVG DNISEKNPNY 
CELTALYWAW KNLESEYLGL AHYRRHFAAR RLGDKKSRVA SGDQLKNALS HVDVLLPTPR
NYFIETNYSQ YVHAHHEEDL AFTREILTEY EPHLVGLYDE VMNRTYGHRF NMFVMKRTVA
DEWCEWLFKV LFELENRLDI SNYSANDARV FGFVSERLLD YWVESRGIAY VEMPVVNLES
QHWFKKGASF LARKVAGSRG