Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_12290 |
Symbol | |
ID | 8395120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1415403 |
End bp | 1415912 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644985986 |
Product | transcription antiterminator |
Protein accession | YP_003143606 |
Protein GI | 257063934 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.369392 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGTACG TAATCCAAGT AGGAACCAAT CAAGAAGACC GCGTCATCGG TCTCATTCGG TCGTTCGTCG GTAAGGATGT CCTGAAAGAG GCGTTTGTAC CCCAGGTCGA AGTCATGCGC CGTTCTAGGG GGCAATGGCA GAAGCGCAAG GAGCTTCTGC TACCAGGATA CGTCTTTGTG ATTGCGACAG ATCCCGAAAA GCTAAATCAG GCGCTTATCG ATGTACCGGC TTTTACGCGC CTCCTGGGTA ATGACGTCTC TTTTACGCCA TTGCTGGATG ATGAGATTAA ATTCCTCGAA GCTTTTACGG CCCCAGATCG ACGGATTGTT CGCATGAGCA AAGGCGTGAT CGAAGGCGAT CAGATCATTA TCAACGAAGG TCCGCTGAGA GGCCAAACTG GCCTGATTAA GCGCATTGAC CGTCACAAGC GTTTGGCGTA TCTCGAGATG ACGGTCATGG GTCGTAAGAA GATGATCAAA GTCGGTCTCG AGATTGTTTC CAAGAGTTAA
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Protein sequence | MWYVIQVGTN QEDRVIGLIR SFVGKDVLKE AFVPQVEVMR RSRGQWQKRK ELLLPGYVFV IATDPEKLNQ ALIDVPAFTR LLGNDVSFTP LLDDEIKFLE AFTAPDRRIV RMSKGVIEGD QIIINEGPLR GQTGLIKRID RHKRLAYLEM TVMGRKKMIK VGLEIVSKS
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