Gene Shel_12290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_12290 
Symbol 
ID8395120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1415403 
End bp1415912 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content50% 
IMG OID644985986 
Producttranscription antiterminator 
Protein accessionYP_003143606 
Protein GI257063934 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.369392 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTACG TAATCCAAGT AGGAACCAAT CAAGAAGACC GCGTCATCGG TCTCATTCGG 
TCGTTCGTCG GTAAGGATGT CCTGAAAGAG GCGTTTGTAC CCCAGGTCGA AGTCATGCGC
CGTTCTAGGG GGCAATGGCA GAAGCGCAAG GAGCTTCTGC TACCAGGATA CGTCTTTGTG
ATTGCGACAG ATCCCGAAAA GCTAAATCAG GCGCTTATCG ATGTACCGGC TTTTACGCGC
CTCCTGGGTA ATGACGTCTC TTTTACGCCA TTGCTGGATG ATGAGATTAA ATTCCTCGAA
GCTTTTACGG CCCCAGATCG ACGGATTGTT CGCATGAGCA AAGGCGTGAT CGAAGGCGAT
CAGATCATTA TCAACGAAGG TCCGCTGAGA GGCCAAACTG GCCTGATTAA GCGCATTGAC
CGTCACAAGC GTTTGGCGTA TCTCGAGATG ACGGTCATGG GTCGTAAGAA GATGATCAAA
GTCGGTCTCG AGATTGTTTC CAAGAGTTAA
 
Protein sequence
MWYVIQVGTN QEDRVIGLIR SFVGKDVLKE AFVPQVEVMR RSRGQWQKRK ELLLPGYVFV 
IATDPEKLNQ ALIDVPAFTR LLGNDVSFTP LLDDEIKFLE AFTAPDRRIV RMSKGVIEGD
QIIINEGPLR GQTGLIKRID RHKRLAYLEM TVMGRKKMIK VGLEIVSKS