Gene Shel_12240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_12240 
Symbol 
ID8395115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1407526 
End bp1408521 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content65% 
IMG OID644985981 
Productphosphotransacetylase 
Protein accessionYP_003143601 
Protein GI257063929 
COG category[C] Energy production and conversion 
COG ID[COG0280] Phosphotransacetylase 
TIGRFAM ID[TIGR00651] phosphate acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGT TCAACGACTT CATGATCGAG CGCGCCAAAG CCGACGTGAA GACCATCGTG 
CTTCCCGAGG GCGCCGACCC CCGCACGCTC GAGGCCGCCG AGATCATCCT GGCCGAGAAG
ATTGCCGACC TGATCATCAT CGGCAACGAG GCCGACATCG TCGCCAGCGG ACGCAACCTG
GAAGGCGCCA CGATTATCGA CAACACCACG TCCGAGCTGC GTGCCGAGCT GGCCGAGCAG
CTCTACGAGA TTCGCAAGAA CAAGGGCATG ACCCCCGAGG ACGCCATGGC ACTCATGGAC
GACGTCAACT ACTTCGGCAC CATGCTGCTC AAGACCCGCC GCGCTGACGG CCTGGTCAGC
GGCGCGGCCC ACTCCACCGC CGACGTGCTG AAGCCGGCAC TGCGCATCAT CCGCACCGCG
CCCGGCACCA AGACCGTGAG CTCCTTCTTC ATGATCGAAG TTCCCGACTG CCCCTACGGC
GAAGACGGCC TGTTCATGTT CAGCGACTGC GGCGTTGTGA TTCAGCCCTC CGCCGAGGAG
CTGAGCGAGA TCGCCATCGC CGCCGCGCAC TCCTTCGAGG ACCTGGTGCA GAAGCCCGCG
CGCGTGGCCA TGCTTTCGCA CTCCACCAAG GGCAGCGCCA AGGACGCCGA CGCCGACAAG
GTTATCGAAG CCACACGCCT GGCCCAGGAG AAGGCCCCCG ATCTGGCCAT CGACGGCGAG
CTGCAAGGCG ACGCGGCAAT CGTTCCCCAT GTGGGAGAAT CCAAGGCCCC GGGTTCGAAG
ATCGCAGGCC ACGCCAACGT GCTGATCTTC CCCGACCTGG ATGCCGGCAA CATCGCCTAC
AAGATGGCCC AGCGCCTGGC CAAGGCCGAC GCCTTCGGCC CCATCACCCA GGGTTTGGCC
ATGCCCATGA ACGATTTGTC CCGCGGCTGC GTGGCTTACG ACATCGTGGG AGCCGTTGCC
ATCACCTCCG TCCAGGCCCA CTGCGCCGGC GTCTAA
 
Protein sequence
MAKFNDFMIE RAKADVKTIV LPEGADPRTL EAAEIILAEK IADLIIIGNE ADIVASGRNL 
EGATIIDNTT SELRAELAEQ LYEIRKNKGM TPEDAMALMD DVNYFGTMLL KTRRADGLVS
GAAHSTADVL KPALRIIRTA PGTKTVSSFF MIEVPDCPYG EDGLFMFSDC GVVIQPSAEE
LSEIAIAAAH SFEDLVQKPA RVAMLSHSTK GSAKDADADK VIEATRLAQE KAPDLAIDGE
LQGDAAIVPH VGESKAPGSK IAGHANVLIF PDLDAGNIAY KMAQRLAKAD AFGPITQGLA
MPMNDLSRGC VAYDIVGAVA ITSVQAHCAG V