Gene Shel_12210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_12210 
Symbol 
ID8395112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1403342 
End bp1404541 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content63% 
IMG OID644985978 
Productacetate kinase 
Protein accessionYP_003143598 
Protein GI257063926 
COG category[C] Energy production and conversion 
COG ID[COG0282] Acetate kinase 
TIGRFAM ID[TIGR00016] acetate kinase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACATCC TCGTAATAAA CGCGAGCTCT TCATCGTTGA AATACCAGCT CATCGACGCA 
GACGGGCCGG TTACCCTGGC GAAAGGGCTC TGTGAACGCG TGGGCTGCGA CGAGCCCTGC
GTCAAGCACG GCGCCGATAC GCTCGAGCGC ATTTTCGACC AGCGGTTCGA CGATCACGAA
GAGGCCCTGG GCGCGGTGCT GGCCGAACTG ACCGCAGGCG AAAAGCCCGC CGTGGCCAGC
CTTGACGAGA TCGATGCCAT CGGGCACCGC GTGCTGCACG GCGGCGACGT TTTCAGTAAA
TCGGTGCTGA TCGACGACGA TGTCATCGCG AAGATCGACG GCCTGTCCGA GCTTGCGCCG
CTGCACAATC CGCCGGCTCT GGCCTGCATC GATGCGTGTA AGAAGCTGCT GCCCGGCCTG
CCGCAGGTGG CCGTTTTCGA CACGGCGTTC TTCCAAACGC TGCCGCCCAG CACACATATG
TACCCGCTGC CGTACGAGCT CGCCAAGGAG CACCGCATCC GCAAGTACGG CGCGCACGGC
ACCTCGCACC GCTACATCGC ACAGCGCTGC GCCGCGCTTT TGGGTCAGCA CGTCGAGGAC
CTGAAAATCG TCACGTGCCA TTTGGGAAAC GGATGCTCCA TGGCGGCCGT CGACCACGGC
ATCGCGGTGG ACACGTCCAT GGGTTTCACG CCGCTGGACG GCCTGATGAT GGGCACGCGC
TGCGGCTCAA TCGACCCGGC CATCGTGACG TACCTGATCA AGGCGGGGTA TTCCGCCGAC
GAGGTCGAGG ACATCATGAA CCGCCAGTCG GGTCTGCTTG GCATTTCGGG GATTTCAAAC
GACGTGCGCG ACATTACCGA GGCGGCGTCG AAAGGCGATG CCCGCGCGTC GCTGGCATAC
GACATGTACG CGCACTCCAT CAGGAAATAC CTGGGCCAGT ACATCGTGGA AATGGCCGGC
GTGGATGCCA TCGTGCTGAC CGCAGGCGTT GGCGAAAACG CCGAGATCAT CCGCCGACGC
GTGTTCGCGG GCCTGCAGCC GCTGGGCATC ATTCTTGACC AGGAGAAGAA CCGCACCCAC
AACAATGGCC ATGAGCGCAT CATCTCCCGA GACGATTCCC CCGTGAAGAT CATCGTCATC
CCCGCCGGCG AAGAGTACAT GATCGCCGCC GACACCCAAG AGATCGTCTC GGCCCTCTAG
 
Protein sequence
MNILVINASS SSLKYQLIDA DGPVTLAKGL CERVGCDEPC VKHGADTLER IFDQRFDDHE 
EALGAVLAEL TAGEKPAVAS LDEIDAIGHR VLHGGDVFSK SVLIDDDVIA KIDGLSELAP
LHNPPALACI DACKKLLPGL PQVAVFDTAF FQTLPPSTHM YPLPYELAKE HRIRKYGAHG
TSHRYIAQRC AALLGQHVED LKIVTCHLGN GCSMAAVDHG IAVDTSMGFT PLDGLMMGTR
CGSIDPAIVT YLIKAGYSAD EVEDIMNRQS GLLGISGISN DVRDITEAAS KGDARASLAY
DMYAHSIRKY LGQYIVEMAG VDAIVLTAGV GENAEIIRRR VFAGLQPLGI ILDQEKNRTH
NNGHERIISR DDSPVKIIVI PAGEEYMIAA DTQEIVSAL