| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_12200 |
|---|
| Symbol | |
|---|
| ID | 8395111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 1402976 |
|---|
| End bp | 1403320 |
|---|
| Gene Length | 345 bp |
|---|
| Protein Length | 114 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644985977 |
|---|
| Product | HIT family hydrolase, diadenosine tetraphosphate hydrolase |
|---|
| Protein accession | YP_003143597 |
|---|
| Protein GI | 257063925 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGACT GCATTTTCTG CAAGATTGCC AACGGAGAGA TCCCGACCAC GGTGGTTTAC
GAAGACGACC TGGTCATGGC CTTCGAGGAC GCCAACCCGC AGATGCCCGT GCACACGCTC
ATCGTGCCGA AGGCTCATTA CGCGAACATG AACGACGACA TGCCTGACGA GCTGATGGGG
CACCTGTTCA ACACCGTGAA GAAAGTTGCC GAGATCAAGG GCGTGGCCGA AAGCGGCTAT
CGCGTGATCG TCAACACCGG CGAAGACGCC CAGCAGGTCG TGAAGCATCT GCACATCCAT
GTGCTCGGCG GCGCCAAGAT GAACGAAGGA TCGCCGGCAC TGTAA
|
|---|
| Protein sequence | MSDCIFCKIA NGEIPTTVVY EDDLVMAFED ANPQMPVHTL IVPKAHYANM NDDMPDELMG
HLFNTVKKVA EIKGVAESGY RVIVNTGEDA QQVVKHLHIH VLGGAKMNEG SPAL
|
|---|
| |