| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_12160 |
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| Symbol | |
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| ID | 8395107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1399151 |
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| End bp | 1400329 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644985973 |
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| Product | ribonuclease D |
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| Protein accession | YP_003143593 |
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| Protein GI | 257063921 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATTACCG AACAGACCCA GCTCGACGCA TTCGTGGAGC ATGCCCGCGC TCACAAGGTG
CTGGCCATCG ACACGGAATT CATGCGCGAG AAGACATATT GGCCCAAGCT GTGCCTGATT
CAACTGGCCA CGCCGGAGCG TGCCGTGGCG GTGGATCCGC TGCGCCTGCA CGATCTGTCG
GCGCTCAACG TCCTGTTCCA GGACGAGAAC ATCCTCAAGC TGTTCCACGC CTCCCGTCAG
GACCTGGAGA TCATCAACAT CGAAATGGGC TGCCTGCCCG CGCCGATTTT CGACACGCAG
ATCGCCGCCG CGCTGCTGGG CCACACCACG CAGATCGGCT ACGGCCCGCT TGTCATGAAC
GAGTTGGGGG TCCACCTGAA AAAGGCCGAC TCCTACACCG ACTGGTCCCG TCGTCCGCTC
ACGAAATCCC AGCTCCAGTA CGCGCTCGAT GACGTCATCT ATCTGCCGAA GCTCTACGAC
AGCATGTCGC GCAAGCTCAA GAAGCTCAAC CGCATGGACT GGCTGGCCTC GGATTTCCGC
GACCTGTCCG ACCCGTCCAA CTACGAGAAG CCGCCCGAGG AGCGCTTCTT GCACCTCAAG
CGCGTCAACC AGCTCAACCA GCAGCAGCTG GCGTGCGCGC GCAACGTGGC CGCATGGCGC
GAACGCAAGG CCATGAAACG CAACATCCCG CGCAAGTGGG TGCTCACCGA CGAGCAGCTG
GTCGAAATCT GCAAGCGCGA GCCGCAAAGC ATCGACGAGC TGTTCATGGT GCGCGGCGTG
GATCGCATAT TGAAGCTGGA CGATGCCCGC GAGGTGCTGC GCGAGTGCCA GGCCGCCTAC
CGCGAGGACC CGGAAACCTG GCCTGAGCTG CCGCGTCCTG CGAAGAGCGA ACGCAACGTG
GATGCACAGG TTGACCTGAT GACCGCGTTG GTGCGCCTGC GCGCCCGCGA GAACAACGTG
GCCTTCCAGG TGCTGGTGTC CCACGACGAA CTGGTCCACA TCGCCCGCGG CCACTACGAG
CGCTGCGACG TGCTGAAGGG ATGGCGCAAG CGCATGGTTG GCGACGAGCT CTTGAAGCTG
GTCAACGGGG AGCTGGCCCT GCGCATCGAA GACGGCAACC TGAAGGTAAC GCGCCGTTCA
CGGTCGTCTT CCCGAAAGCC AAAAGGCCCC GACGCCTAA
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| Protein sequence | MITEQTQLDA FVEHARAHKV LAIDTEFMRE KTYWPKLCLI QLATPERAVA VDPLRLHDLS
ALNVLFQDEN ILKLFHASRQ DLEIINIEMG CLPAPIFDTQ IAAALLGHTT QIGYGPLVMN
ELGVHLKKAD SYTDWSRRPL TKSQLQYALD DVIYLPKLYD SMSRKLKKLN RMDWLASDFR
DLSDPSNYEK PPEERFLHLK RVNQLNQQQL ACARNVAAWR ERKAMKRNIP RKWVLTDEQL
VEICKREPQS IDELFMVRGV DRILKLDDAR EVLRECQAAY REDPETWPEL PRPAKSERNV
DAQVDLMTAL VRLRARENNV AFQVLVSHDE LVHIARGHYE RCDVLKGWRK RMVGDELLKL
VNGELALRIE DGNLKVTRRS RSSSRKPKGP DA
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