| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_12140 |
|---|
| Symbol | |
|---|
| ID | 8395105 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 1397593 |
|---|
| End bp | 1398462 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644985971 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003143591 |
|---|
| Protein GI | 257063919 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2326] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTCA AAGACTGCAT CGTCGACGGC TCGAAGCATT TCCATATCGC CGACGCGCCC
ACTTCGGCGA AGATCCCGAA ATCCGAACGC GAACACTACG AGGAGCTCAC CGATGCCAAC
CGCCAGCGCA TAATCGAGCT GCAGGACCGC CTGTACGCCC AAGGTTGCGA AGGCGTGCTG
GTCATGTTCC AGGCCATGGA CGCCGCCGGC AAGGACTCCA CCATCAAGCA CGTCATGAGC
GGCATGAACC CGCAAGGCGT CGAAGTATAC AGCTTCAAAA CCCCGTCCAA GGAGGAACTG
GCCCACGACT ACCTGTGGCG CGCCTATTCC CACCTGCCCA AACGCGGCAA CATCGGCGTG
TTCAACCGCA GCTACTACGA GGACGTGCTG GTGGTGCGCA CCCACGGCCT GTGGCACGAC
TACAACATGC CGAAACGCTG CCTCGACATG TCCGAAAAGG ACTTCTTCGC GGCGCGCTAC
AAGCACATCG CCGGCTTCGA GAAGCACCTC TACGAAAACG GATATCGCCT GGTCAAGGTG
TTTTTGAACG TGGGAATGGA CGAACAGAAG AAACGCTTCA TCGCACGCAT CGACGAACCA
GCCAAAAACT GGAAGTTCTC CCCCGCCGAC CTTGACGAAC GCCCCTTGTG GCCGAAGTAC
ATGGAGGCCT TCGAGGACGC CATCAACGGC ACGTCCACCA AGCATTGCCC CTGGTACGTG
ATTCCCGCCG ACCAGAAGTG GTACGCCCGC TACCTGGTAA GCGAAGCGCT GCTGGCCACG
CTTGAGGACA TAAACCCGCA ATACCCCACC GTCTCGGAAG AAGACCTGGA AACCATGGCC
GTCTGCAAGG TGCGCCTGGA AACCGAATAG
|
|---|
| Protein sequence | MELKDCIVDG SKHFHIADAP TSAKIPKSER EHYEELTDAN RQRIIELQDR LYAQGCEGVL
VMFQAMDAAG KDSTIKHVMS GMNPQGVEVY SFKTPSKEEL AHDYLWRAYS HLPKRGNIGV
FNRSYYEDVL VVRTHGLWHD YNMPKRCLDM SEKDFFAARY KHIAGFEKHL YENGYRLVKV
FLNVGMDEQK KRFIARIDEP AKNWKFSPAD LDERPLWPKY MEAFEDAING TSTKHCPWYV
IPADQKWYAR YLVSEALLAT LEDINPQYPT VSEEDLETMA VCKVRLETE
|
|---|
| |