| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_12120 |
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| Symbol | |
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| ID | 8395103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 1394989 |
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| End bp | 1395549 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644985969 |
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| Product | RNA polymerase sigma factor, sigma-70 family |
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| Protein accession | YP_003143589 |
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| Protein GI | 257063917 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAAGCC CCCTGAAAAC GAAATCCATC CGCACATTCG GCGGCCATTT CGCGTTGTCA
TGGTTAGAGG AGGTGATGGC TTTGCCGCTC AGAAAGCAAA GCAACCTGGA TTACGAGCAA
GCGCGGCACA TAGTTGAGGA ATGCTACGAT AGCATCTTGG CGTACTGCAC CCGCCATGCC
CCGGCCGGCT ACGAAGCGGC CGACCTGGCC CAGGAGACGT TTTTGCGGTT CGTCCGCACG
CGAAGCTACC AAGACCGCGG AAGGCCCATA GCGTATCTCA TGACCATAGC CAGAAACGTC
TGCATCGACG CCGGCCGTAA AAACCGGCTG CAAACGGTGC CGCTGGATTT CGAACCCGCA
GATCCCGAAG ACGAGTTCTG CGCGGACGTC CGCAAGGCCT TGGAATCGCT GCCCGATGAG
CCCCGCGAGC TTCTGGAGAT GCGGTACGGC TTCGGACTGC AGGTCAACGA GATAGCGCGC
ATGTTCGACG AAAGCCGCTA TGCAACACGC AGGAAGATCA AGAAAGCGCT CGAGCTGTTG
CACGAGGAAT TGAAGGGGTG A
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| Protein sequence | MESPLKTKSI RTFGGHFALS WLEEVMALPL RKQSNLDYEQ ARHIVEECYD SILAYCTRHA
PAGYEAADLA QETFLRFVRT RSYQDRGRPI AYLMTIARNV CIDAGRKNRL QTVPLDFEPA
DPEDEFCADV RKALESLPDE PRELLEMRYG FGLQVNEIAR MFDESRYATR RKIKKALELL
HEELKG
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