| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_12010 |
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| Symbol | |
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| ID | 8395092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 1381163 |
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| End bp | 1382068 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644985958 |
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| Product | sphingosine/diacylglycerol kinase-like enzyme |
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| Protein accession | YP_003143578 |
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| Protein GI | 257063906 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000256541 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.185662 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGGATCC TCGTCATCAA CAATATTTCT TCGGGCCACA ACGAAGGCAC CATTTACGAC
TTCGTGCGGG CGTTCAACCG CGACGGCGAC GAGGTGGTCA TGCGCACCAC CGACGGCCAC
ACGCGCATCG AGCACATGTT GGACGACGCC GAGTCGTTCG ACCTGGTGGT CGCATCCGGC
GGCGACGGTA CCGTCACCAC GGTGCTCCAT CGGCTCCGCA ACACCGACAC GCCCGTCCTG
CCCTTCCCCG CCGGGACCGC CAACCTGCTC ACGCTCAACC TGGAGCAGCC CACCGAGACC
CATGCCCTGG CGCAACTGGC CCGAAACGGG CAGACGCTGG ACTTCGACCT GGCCGAGCTC
GAGACCTCGG CAGGCACCTT CGGCTTCTCC ATCATGTCGG GCATCGGATA CGACGCTTCC
ATCATGCAGA TGGCCGAGGC CGGCAAGGAG GTCTTCGGCG AGCTGGCATA CTTCCTGGCC
GCGGGCGCAA ACCTCGAGCC GCAGCACGCC GACATCAAGC TGGACATCGA CGGCAAGGTC
ATCAACACTG ACGGCATCGG CGTGATCTTC GTCAACTTCT CGAAAATCCA GTTCGACCTT
TCGCTCACCC ACAACAACCA GCCCCGCGAC GGCAAGCTCG ATGTCGTCGT CCTCAAGGCG
AAATACGCCG TGGAGCTGCT GCCGGTCGTA TTCGCTGCCA TGCGCGACCG CGATGGCAGT
TACCCTGGCC GCACCGACGC CATGGAAATC TACTCGGGAC GCCAGATCAA GGTGGTCACC
GACCCACCGC TGAGCTTGGA ATACGACGGC GAACCGTTGG ACGTAACCTC GCCGGTGACC
GCGCGCATCC TGCCCGGAGC CGCCTGCATC GTAGTCGACG ACGACACCCG CGCCCTGTTC
TCGTAG
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| Protein sequence | MRILVINNIS SGHNEGTIYD FVRAFNRDGD EVVMRTTDGH TRIEHMLDDA ESFDLVVASG
GDGTVTTVLH RLRNTDTPVL PFPAGTANLL TLNLEQPTET HALAQLARNG QTLDFDLAEL
ETSAGTFGFS IMSGIGYDAS IMQMAEAGKE VFGELAYFLA AGANLEPQHA DIKLDIDGKV
INTDGIGVIF VNFSKIQFDL SLTHNNQPRD GKLDVVVLKA KYAVELLPVV FAAMRDRDGS
YPGRTDAMEI YSGRQIKVVT DPPLSLEYDG EPLDVTSPVT ARILPGAACI VVDDDTRALF
S
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