Gene Shel_12000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_12000 
Symbol 
ID8395091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1379805 
End bp1380707 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content57% 
IMG OID644985957 
Producttellurium resistance membrane protein TerC 
Protein accessionYP_003143577 
Protein GI257063905 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0861] Membrane protein TerC, possibly involved in tellurium resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000641872 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.194106 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTAT CAATCTTCAC CACCCCGGAG GCTTGGATCA GCCTCGTGAC GCTCATCTTC 
CTGGAGATTA TCTTGGGCGT CGACAACATC GTATTCATCG TCATCACCAC CGACCGCCTG
CCCGTTAACA AGCAGCACAT CGGCCGTAAG CTCGGCCTTG CCGGCGCGTT CATCATGCGC
TCGCTGTTTT TGTGCTTCGC GTCGTTTTTG GTGCATCTGG TCGACCCGTT GTTCTCGATC
GACCTTGGGT TCTATGCGCA CGGGTTCAGC ATCCGCGACC TGGTGCTGTT CGCTGGCGGC
GTGTACCTCA TTTATAAGGG CGTTTCCGAA ATGCGCTCGA TGTTCACGCT GAACGACCTG
GTGCCTGGAG AGGTGGCCGA CCCCGACAAC CTCACCCGCA AGATCAGCCT GCCGCAGGCC
ATCGCCACCA TCATGGTCAT GGATATCGTG TTCTCCATCG ATTCGGTCAT CACCGCGGTT
GGCATGGCGA ATCACCTCAT CATCATGATT CTTGCGGTCA TGTTGGCCAT CATCCTCATG
ATGGTCTTCA TCGACACTAT CTCGAAATTC ATCAACAGCA ACCCGGCCAT TAAGCTGTTG
GCCCTGAGCT TCATCGTCAT GATCGGCATC CTGCTGACTC TGGACGGCCT GGGCATCAAC
TCCGGCATCG AGGTGCTGGA CATGCACATG GAGAAGCTGA TGGTCTACTT CGCCATGGTG
TTCTCGATCT TTACCACCAT GCTGGGCATC AGCTACCGCC GCAAGGCCGT GGGCTACCTG
AAGGAAGAGC ACCCCGAGTT GATGTACGTT CCCGCCGACG ACGATTCGGA CGAGGACGGC
GGCCAGCTTC ACATCAAGGA CGTGAAGCCG GAGCAGGCTG CGGTTTCGGG AGGAACCCAG
TAA
 
Protein sequence
MDLSIFTTPE AWISLVTLIF LEIILGVDNI VFIVITTDRL PVNKQHIGRK LGLAGAFIMR 
SLFLCFASFL VHLVDPLFSI DLGFYAHGFS IRDLVLFAGG VYLIYKGVSE MRSMFTLNDL
VPGEVADPDN LTRKISLPQA IATIMVMDIV FSIDSVITAV GMANHLIIMI LAVMLAIILM
MVFIDTISKF INSNPAIKLL ALSFIVMIGI LLTLDGLGIN SGIEVLDMHM EKLMVYFAMV
FSIFTTMLGI SYRRKAVGYL KEEHPELMYV PADDDSDEDG GQLHIKDVKP EQAAVSGGTQ