Gene Shel_11870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_11870 
Symbol 
ID8395078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1370680 
End bp1371474 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content66% 
IMG OID644985944 
Product2-polyprenylphenol hydroxylase-like oxidoreductase 
Protein accessionYP_003143568 
Protein GI257063896 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00120516 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0310834 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCATTA CTCCGAATTC GGAGCACTTT GAGGAAAGGG CCCGGATCTG CTCCAACGAG 
CAGGTCGGGC CTGGCCTGTT CAAGATGGTG CTCCATTGCC CGCGCTCCGC GGCGGCCATC
AAACCCGGCC AATTCATCCA CATGCGCCTC GACGGCTTCG AGGCCCACAT CCTGCGCCGT
CCCTTCTCCG TGTACAAAGC CGACACGCAG GAAGGCACCA TGGACATCAT CTACCAGGTG
GTGGGCACGG GCTCGCAATG GATGACCGGA CTTGAGCCCG GGCACACCGT ATCCATCATG
GCGGCGCTGG GCAACACCTG GCAGCCCGTG GACGGCAAGT TGCTGCTGGT CTGCGGCGGC
GTTGGTGCGG CGCCCCTGTT CATGTTCGCG CAGCAGCTCA AGGCCGAAGG CCGCGACTTC
GAGGTCATCC TGGGCGCGCG CACGGCCGAC ATGCTGGTCA CGAAGGCCGA CTACACGGCG
CTTCTGGGCC GCGAGCCGAT CATCGCCACC GACGACGGCA CCGAAGGGTT CTCCGGGTTC
GCCACCGTGC CCATGCAGCA GCAGCTCGAA ACGGGGGAGT ACTCCGCGGT GTACTGCTGC
GGGCCCGACC CGTTCATGCG CATCGTGTCC GGCATCGTGG CCGACGCGGG CATCGACTGC
TGGATCTCCG AGGAGAAGCG CATGGCCTGC GGCATCGGCG CGTGCCTGTC CTGCGTGGTG
GAAACCGTGG ACGGCAAGAA GCGCTCCTGC GTGGACGGCC CCGTTTTCAA CGCGAAGGAT
GTGGTGTGGG CATGA
 
Protein sequence
MCITPNSEHF EERARICSNE QVGPGLFKMV LHCPRSAAAI KPGQFIHMRL DGFEAHILRR 
PFSVYKADTQ EGTMDIIYQV VGTGSQWMTG LEPGHTVSIM AALGNTWQPV DGKLLLVCGG
VGAAPLFMFA QQLKAEGRDF EVILGARTAD MLVTKADYTA LLGREPIIAT DDGTEGFSGF
ATVPMQQQLE TGEYSAVYCC GPDPFMRIVS GIVADAGIDC WISEEKRMAC GIGACLSCVV
ETVDGKKRSC VDGPVFNAKD VVWA