| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_11840 |
|---|
| Symbol | |
|---|
| ID | 8395075 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 1367856 |
|---|
| End bp | 1368443 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644985941 |
|---|
| Product | pyrimidine operon attenuation protein/uracil phosphoribosyltransferase |
|---|
| Protein accession | YP_003143565 |
|---|
| Protein GI | 257063893 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2065] Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.125701 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00347451 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACG AAAGTCAGGT GAAATCCGTA GTCATGGACG CTGCGGAAAT CGATCGCTCG
CTGACGCGCA TCGCGCATCA AATCCTGGAG GCGAACCACG GCTGCGACAA CATCGCGCTC
GTCGGCATCG TCACCCGCGG CGATCTGCTG GCGAAGCGCC TGGCCAGCAT CATCGAGGGG
ATCGAGGGCA AGGAGGTGCC GCTGGGAAGC CTGGACATCA GCTTCTACCG CGACGACTAC
CTGACCATCT TGGCCCCCGA AGTCCATGAA ACCCGCATCA GCTTCGACGT GACCGGCAAA
GACGTCATCC TGGTCGACGA CGTCCTGTAC ACCGGTCGCA CCATCCGTGC GGCGCTGGAC
GCCCTCATGG ACCTGGGTCG TCCGAAAACC ATCCAGCTGG CGGTATTGGT GGACCGCGGC
CATCGCGAAC TGCCCATTCG CGCCGATTTC GTGGGCAAGA ACGTCCCTTC CGCACACGAC
GAGAACGTCC GCATGTTCCT CGAGGAAGTG GACGGCATCA CCGCTGTCGA AATTCTGGAC
ATCAAGCCCG GCACCCGCGC CGGATCCGCA CCGCTGGGAG GTGAGTAG
|
|---|
| Protein sequence | MSDESQVKSV VMDAAEIDRS LTRIAHQILE ANHGCDNIAL VGIVTRGDLL AKRLASIIEG
IEGKEVPLGS LDISFYRDDY LTILAPEVHE TRISFDVTGK DVILVDDVLY TGRTIRAALD
ALMDLGRPKT IQLAVLVDRG HRELPIRADF VGKNVPSAHD ENVRMFLEEV DGITAVEILD
IKPGTRAGSA PLGGE
|
|---|
| |