Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_11780 |
Symbol | |
ID | 8395069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1359954 |
End bp | 1360493 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644985935 |
Product | hydrogenase maturation protease |
Protein accession | YP_003143559 |
Protein GI | 257063887 |
COG category | [C] Energy production and conversion |
COG ID | [COG0680] Ni,Fe-hydrogenase maturation factor |
TIGRFAM ID | [TIGR00072] hydrogenase maturation protease |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0353355 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGAAAA TTGCTGTCAT ATGTGTGGGC AACCGTCTGA TGCTGGATGA CGGCATTGGG CCGGCGGTGT ACGACGCCCT GACCGAGGAC TATCGGTTCC CGGAAAACGT CGAGCTCATC GATGCGGGCT GCATGAGCAT GGACCTGCTG CACGTGGTTC GCGACTTCGA CTACATCATC ACGGTGGACG CCATCGACGG TCTGGACGCG GATCCGGGCA CGGTGTTCCG TTTCGCGCCG GAGGACATCG GCGGGGGAGT CGCCATCATG CAATCCCTGC ATGACCTGCG CCTTATCGAC CTGTTCAACG CTGCGGCGCT GCTCGGCTAC CACGCCGAAG GCATCTGCTA CGGCATGAAG GTGCTGAACA TGCACCCGCT GGATCTGACC GAAGGCCTTA CGCAGCCGGT CTTCGACGCG CTGCCGCTGC TGCGCGATGC GGTGCTGGCG GAGCTTCTGG GTCGCGGTGT GGAAATCCGC AACGCCGACG GGTCCGTCTT CGTGCCGCCC GCAGGCGACC AGCCCGATCC GTGCGAATAG
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Protein sequence | MEKIAVICVG NRLMLDDGIG PAVYDALTED YRFPENVELI DAGCMSMDLL HVVRDFDYII TVDAIDGLDA DPGTVFRFAP EDIGGGVAIM QSLHDLRLID LFNAAALLGY HAEGICYGMK VLNMHPLDLT EGLTQPVFDA LPLLRDAVLA ELLGRGVEIR NADGSVFVPP AGDQPDPCE
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