Gene Shel_11780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_11780 
Symbol 
ID8395069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1359954 
End bp1360493 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content63% 
IMG OID644985935 
Producthydrogenase maturation protease 
Protein accessionYP_003143559 
Protein GI257063887 
COG category[C] Energy production and conversion 
COG ID[COG0680] Ni,Fe-hydrogenase maturation factor 
TIGRFAM ID[TIGR00072] hydrogenase maturation protease 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0353355 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAAAA TTGCTGTCAT ATGTGTGGGC AACCGTCTGA TGCTGGATGA CGGCATTGGG 
CCGGCGGTGT ACGACGCCCT GACCGAGGAC TATCGGTTCC CGGAAAACGT CGAGCTCATC
GATGCGGGCT GCATGAGCAT GGACCTGCTG CACGTGGTTC GCGACTTCGA CTACATCATC
ACGGTGGACG CCATCGACGG TCTGGACGCG GATCCGGGCA CGGTGTTCCG TTTCGCGCCG
GAGGACATCG GCGGGGGAGT CGCCATCATG CAATCCCTGC ATGACCTGCG CCTTATCGAC
CTGTTCAACG CTGCGGCGCT GCTCGGCTAC CACGCCGAAG GCATCTGCTA CGGCATGAAG
GTGCTGAACA TGCACCCGCT GGATCTGACC GAAGGCCTTA CGCAGCCGGT CTTCGACGCG
CTGCCGCTGC TGCGCGATGC GGTGCTGGCG GAGCTTCTGG GTCGCGGTGT GGAAATCCGC
AACGCCGACG GGTCCGTCTT CGTGCCGCCC GCAGGCGACC AGCCCGATCC GTGCGAATAG
 
Protein sequence
MEKIAVICVG NRLMLDDGIG PAVYDALTED YRFPENVELI DAGCMSMDLL HVVRDFDYII 
TVDAIDGLDA DPGTVFRFAP EDIGGGVAIM QSLHDLRLID LFNAAALLGY HAEGICYGMK
VLNMHPLDLT EGLTQPVFDA LPLLRDAVLA ELLGRGVEIR NADGSVFVPP AGDQPDPCE