| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_11730 |
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| Symbol | |
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| ID | 8395064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1353019 |
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| End bp | 1353639 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644985930 |
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| Product | protease subunit of ATP-dependent protease |
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| Protein accession | YP_003143554 |
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| Protein GI | 257063882 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.533928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.37296 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACTTTA AGACCAATTA CACCATCCCG TATGTTATCG AGCAGTCGCC GCGCGGCGAG
CGCACGTATG ACATCTACAG CCGCTTGCTG AACGACCGCA TCATCTTTTT GGGCGATGCC
ATCGACGACA ACGTGGCAAA CCTTGTGGTC GCGCAGCTGC TCCACCTGGA GAGCTCCGAC
CCCGAGAAGG ACATTTCGCT GTACATCAAC TCTCCGGGAG GAAGCGTGTC CGCAGGCATG
GCCATCTACG ACGCCATGCA GTTCATCCGC TGCGACGTGT CCACCGTCTG CATCGGCATG
GCCGCATCCA TGGCTTCGGT TCTGACCGCC GCCGGCACCC CCGGCAAGCG CTTCATCACG
CCGAATTCCC AGATCATGAT CCATCAGCCC ATGGGCGGCG CCGAGTCCCG CACCCAGCAG
ACCGATTTCG AGATCGCTGC AACCGAGATG CGCAAGACCC GCGAACGCCT CGAAGGCATT
CTGGCTGCGC ACACCGGCCA GACCATCGAG ACCATTCATG CCGACTCCGA GCGCGACCAC
TGGCTGACCG CCGAGGAGGC CAAGGCATAC GGCCTGGTGG ACGAAATCAT CACCTCCCGT
GGAACCAACG CTTCGAAGTA A
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| Protein sequence | MDFKTNYTIP YVIEQSPRGE RTYDIYSRLL NDRIIFLGDA IDDNVANLVV AQLLHLESSD
PEKDISLYIN SPGGSVSAGM AIYDAMQFIR CDVSTVCIGM AASMASVLTA AGTPGKRFIT
PNSQIMIHQP MGGAESRTQQ TDFEIAATEM RKTRERLEGI LAAHTGQTIE TIHADSERDH
WLTAEEAKAY GLVDEIITSR GTNASK
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