| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_11690 |
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| Symbol | |
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| ID | 8395060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1347332 |
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| End bp | 1348261 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644985926 |
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| Product | conserved protein of unknown function BmrU |
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| Protein accession | YP_003143551 |
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| Protein GI | 257063879 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
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| TIGRFAM ID | [TIGR00147] lipid kinase, YegS/Rv2252/BmrU family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.38542 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCATCGAT TCGGTCGGGT GCTTGTCGTC GCGAACCCAG CGGCGCAAAA CGGCGTCGGT
GCCCGGCGCA TTGCCTCGCT CCGTCAGGCC GAAAACGCCC TTCCCGAAAC CGTTGAATCC
CTGCAGGTGG TTGCCACCGA GCACGCTGGC CACGCCAGGG AGCTGGGCGC CGGCTCTGCC
GACTTCGACA CGCTCATCGC CCTGGGCGGC GACGGCGTGA TCCACGAGGT GCTCAACGGC
GTTATGACCT TGCCTGAGCA GGCCAGGCCC GTCTTCGGTA TCTTGCCCTG CGGCAACGGA
AACGACCTTG CCCGCACACT GCGCATCCCC TTCGACCAGG CCGGCTCGCT TGCCGCGCTC
AGTCGCGCCC GCGTCGTACC CTACGACATC GGCAACGTCA ACGGGGAGTG GTTCATCGAG
ACGCTGTCCT TCGGCTTCGA CGCGGCCATC GCCATCGGCA CCCATACGCG CCGCATGCGC
ACGGGCCACA CGGGCACCCG CCTTTACCTT GAGGAAGGTG CCGAACAGCT GCTGCGCAAG
CTGCGCCCCT ATACATATAC TGCCAGCGTC GACGGGGGAG AGCCTCGGCG CGGCGGCATG
CTCATGTTTG CCGTGCAGAA CGGGCCCACC TACGGCGGCG GCTGGCGCAT ATGCCCTGAT
GCGGATCCCA CCGACGGCCG CTTCGACATC TGCCGGGCCG TGCCGCCTCT GGCGAACCTT
CATGCGGCGG CGCTGTTCCT GCGTGCCAAA AGCGGGGGAC ACGTGAACTC GCCCCACGTG
CGGATGGAAC GCGCAACCGC TCTGGACATC GCCTTCGACG AGGCCCCCGC GGCCCAGGCC
GACGGCGAAA AGATCGAGGG CAGCACGTTC CATGTGACCA TGCATCCCGG CGCGCTTCGC
GTCCTGGCGG GCGAGGGGGT GGCGTTCTAA
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| Protein sequence | MHRFGRVLVV ANPAAQNGVG ARRIASLRQA ENALPETVES LQVVATEHAG HARELGAGSA
DFDTLIALGG DGVIHEVLNG VMTLPEQARP VFGILPCGNG NDLARTLRIP FDQAGSLAAL
SRARVVPYDI GNVNGEWFIE TLSFGFDAAI AIGTHTRRMR TGHTGTRLYL EEGAEQLLRK
LRPYTYTASV DGGEPRRGGM LMFAVQNGPT YGGGWRICPD ADPTDGRFDI CRAVPPLANL
HAAALFLRAK SGGHVNSPHV RMERATALDI AFDEAPAAQA DGEKIEGSTF HVTMHPGALR
VLAGEGVAF
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