Gene Shel_11570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_11570 
Symbol 
ID8395048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1330787 
End bp1332370 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content64% 
IMG OID644985914 
Producthypothetical protein 
Protein accessionYP_003143540 
Protein GI257063868 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGCTCA AGCCCCCGTA CGAGTTCACC CAGCACGATA CCCTCGTGGC GATACTCGGC 
CTGGTCCAGG CCATCTTCTG GGTGCAGGTG TTCGACTTCG ACGACTTCCC CTGGTACTAC
TACTGGGGCA CGCCGACCAC GCCCGGCATC GGCATTGCCG TGCTGACCTG CGCGTCGCTG
GTGCTGGCAT GCATCGCCCT GGGCAAGAGG GCGCGCTACG ACCGATGGTC CCTGTCGCTT
ATGGGCGCCA CCGCAGTCGT GTCCGTCCTG CCTGCGCTTA CGGCCAACGG CCAGCTCAGG
TTCTTCAGCT GCCTGGTGCT TCTGGGGCTT TACCCCATGG CCATGCTGGC TCTTTCCGGC
ATGTGGAACG GCGCCTTCCT GCGCATGCAT ACGCTGCTGA CCAGCTGGGG TTTCACCATA
CGGAGCATGT TCTACCGCGC AACTTGGCCC ATGAAGGCCG TCTTCCGCAA GGGCGGCACC
GTTGACTCCG CGGGGCAGAC CGCCTCGGAC AAGCGCCTGT CCGAGGGCGT GCTTGTCGGC
GTGCTGATCT CTTGCGGCCT GCTGGTGGTC GTGCTGCCGC TGCTGGCTTC CGCCGACGCT
GTGTTCGGCC ACATCTTCGG CCGCATTGGC GAGTGGCTTG CGCGCCTCGA CATCTGGGAC
ATCGTGGGGC ATCTGGTCTA CCTCATGCTG GCCGCAGCTC CTCTGGCGGC GCTTCTGTGG
AACCTCACCC ACGACGACGG CTACTTGGCC GGCCGTCAGT TCGACCCGCC GCTGCCGCGC
GGCACTGTGC CTCCCGCCAC CGTGCTGACC GTACTCGTCA TCATGGACAC GGTGTATCTC
CTGTTCGCAG GCGTGCAGGT TGTCTACCTG TTCGGCGGCG TGGAATCTCC CGTGCTTGCC
GACGGCTACG CGGCCTACGC TCGGCAGGGC TTCTTCCAGC TTATTCTGGT CGTGTGCATC
AACGTGGTCA TGACCTATGT GGGCATGCGC ATCGTGGACA AGGAGCGCGG CCTGGTAACG
GCCATGCGCG CCTTCGCGGT TCTGCTTCAG GTGCTCACGC TGGTGGTACT GGTGTCGTCG
CTGTGGCGCA TGACCATGTA CGTGCAGGCC TACGGCTTCT CTATGGAGCG CGCGCTCACC
TATGTGGGTA TGGCTTGGGT GGCGGTGGTC ATCGTGGCCC TGACCGTGCG CCTGTTCTAC
CGCGAGTTCA AGGTGTTCGC CGTGGCGTTC GTGGCAGGCC TTGCCCTGTG GATCGGCTTC
TCGGTGTCGA TGCCCGCGAC GCAGATCGCG AACTACAACG TGGACCATTA CCTGGCGGGC
GACATCGCCG ATCCGGATGT GGACTACCTC AGCAACCTGT CCTACGAGTC CAAACCCGCC
ATCGAGCGCC TGTATGCGGC CACGTCCCAA GCGTCGATCG GCTCGGACGC CTACTATATA
CATCAGCAGT GCGAGTCTGT GCTGGCGGAC TCCGGCGAGC CTTTGGAAAT CAGTTACAGC
TACAGGGACA CGCTGTTCCA TAAAGAGGGG GAGGGCTACA TCGCCTGGCA GTACCAGTGC
CTCCCGTACT GGGTAATCGA CTAG
 
Protein sequence
MPLKPPYEFT QHDTLVAILG LVQAIFWVQV FDFDDFPWYY YWGTPTTPGI GIAVLTCASL 
VLACIALGKR ARYDRWSLSL MGATAVVSVL PALTANGQLR FFSCLVLLGL YPMAMLALSG
MWNGAFLRMH TLLTSWGFTI RSMFYRATWP MKAVFRKGGT VDSAGQTASD KRLSEGVLVG
VLISCGLLVV VLPLLASADA VFGHIFGRIG EWLARLDIWD IVGHLVYLML AAAPLAALLW
NLTHDDGYLA GRQFDPPLPR GTVPPATVLT VLVIMDTVYL LFAGVQVVYL FGGVESPVLA
DGYAAYARQG FFQLILVVCI NVVMTYVGMR IVDKERGLVT AMRAFAVLLQ VLTLVVLVSS
LWRMTMYVQA YGFSMERALT YVGMAWVAVV IVALTVRLFY REFKVFAVAF VAGLALWIGF
SVSMPATQIA NYNVDHYLAG DIADPDVDYL SNLSYESKPA IERLYAATSQ ASIGSDAYYI
HQQCESVLAD SGEPLEISYS YRDTLFHKEG EGYIAWQYQC LPYWVID