Gene Shel_11560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_11560 
Symbol 
ID8395047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1330209 
End bp1330421 
Gene Length213 bp 
Protein Length70 aa 
Translation table11 
GC content57% 
IMG OID644985913 
Productpredicted transcriptional regulator 
Protein accessionYP_003143539 
Protein GI257063867 
COG category[K] Transcription 
COG ID[COG3655] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG TCGTGAATCT GGATGTGATG CTTGCCAAGC GCAAGATGTC GTTGACCCAG 
CTCAGCGACC AGGTTGGCAT TACCATCGCA AACCTGTCGA ACCTCAAGAC CGGCAAGGCC
AAGGCAATCC GGTTCTCCAC GCTCGCAGCG CTGTGCGAGG TGCTGGACTG CCAGCCCGGC
GATCTTTTGG AGTACGTAGA AGAGAAGGAC TGA
 
Protein sequence
MRIVVNLDVM LAKRKMSLTQ LSDQVGITIA NLSNLKTGKA KAIRFSTLAA LCEVLDCQPG 
DLLEYVEEKD