Gene Shel_11450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_11450 
Symbol 
ID8395036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1304079 
End bp1305059 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content54% 
IMG OID644985903 
Producthypothetical protein 
Protein accessionYP_003143529 
Protein GI257063857 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0522754 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAACA TCCCCAATCC TCAGCCGATT ATGCCCCCGA GCGGGCAGAC GTATTACGAC 
CCCAATCAAG AATTCAATTA CAACACGCCG CCGCAGAAAG AGAAGTTCTA TCGCAAGACC
TGGTTTGTGG TTCTGCTCAT GATTCTGTTT CCTCCTATCG GCATTGTTCT GGCCTGGGTT
TTTAAGAAGC CTACAAATCA GGTAGTGCGC ATTGTTCTCA CGGTATTGGC CGTGCTGATT
ATGATTGGCG CAGTTGCGGG TGGCGGATCC AGTGAGACAA CCGAAAGCAG CACGTCGACT
TCGGACCAGC CTGCGGCAAC CGAATCGGCT GCCCAGGAGA ACAAGGCCGA AGTTGAGGCG
CCGGAGCCGG AGCCCGAGCC GGTGGTTGAA GAGCCGACGC TCGAATCAAT TACCGCGCTA
TACCTTGGCG ACACCGAAGA AGGTGCTACT GTTACGGCAG AAGACGTCAC CGTGACCGGC
ACGTATTCTG ACGGAACGGA AGAAGAGGTG ACTGATTTCA CGCTGGATGA CGAACCTACG
CTCGAAGCCG GCCAGGTGGT CACGGTTGTG GTAACCGCAG AAGATTGCAC GTACGAGATG
AGCGTTGCCT GCACAACACC GCTTAAAGAG GACTATGTGG CTACGTGCGA AAGCGTCGAT
TACGATTCTC TTGCCCGTAA CGAGTCCGAT TGGGTTGGGG TGAACGTAAC CGTTACCGGT
AAGGTCATAC AAGTAATGGA GGACTCTTCG GGGAACCTCT ACCGCATCGA CATAACCGAC
GAGGGCAACG GATTCTGGGA TGATACCGTG CTCGTGGCCA TTGACGCCGA GAAGCTAGAA
GACCGTATTC TCGAAGACGA CGTCGTGACC GTGTATGGCA CATCGACGGG CCTCTACACA
TACGAGACGG TAATGGGATC AACGATGACG GTGCCTTCGA TCATGGCGGA ATTCATCGAT
TTCGAATACC ACATCGACTA A
 
Protein sequence
MDNIPNPQPI MPPSGQTYYD PNQEFNYNTP PQKEKFYRKT WFVVLLMILF PPIGIVLAWV 
FKKPTNQVVR IVLTVLAVLI MIGAVAGGGS SETTESSTST SDQPAATESA AQENKAEVEA
PEPEPEPVVE EPTLESITAL YLGDTEEGAT VTAEDVTVTG TYSDGTEEEV TDFTLDDEPT
LEAGQVVTVV VTAEDCTYEM SVACTTPLKE DYVATCESVD YDSLARNESD WVGVNVTVTG
KVIQVMEDSS GNLYRIDITD EGNGFWDDTV LVAIDAEKLE DRILEDDVVT VYGTSTGLYT
YETVMGSTMT VPSIMAEFID FEYHID