Gene Shel_11420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_11420 
Symbol 
ID8395033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1299964 
End bp1300179 
Gene Length216 bp 
Protein Length71 aa 
Translation table11 
GC content55% 
IMG OID644985900 
Productpredicted membrane protein 
Protein accessionYP_003143526 
Protein GI257063854 
COG category[S] Function unknown 
COG ID[COG2314] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.45156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCG ACCACATGGC CAACAAGTTC GTCTACATTG TCCTGGCTAT TTTCCTGGGC 
GACTTCGGCG TCCACAAGTT CTATTGCGGC AAGACCAAGA TGGGCATCCT GTACCTGGTA
TTCTGCTGGA CGGGTGTTCC GGCCATCATC GGCTTCATCG AGGGCATCCT GGCCATCTTC
AAGCCAGCTG ACGCTGCGAA CATGATCTGG GTTTAA
 
Protein sequence
MARDHMANKF VYIVLAIFLG DFGVHKFYCG KTKMGILYLV FCWTGVPAII GFIEGILAIF 
KPADAANMIW V