Gene Shel_11270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_11270 
Symbol 
ID8395018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1284065 
End bp1284640 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content62% 
IMG OID644985885 
ProductFe-S-cluster-containing hydrogenase subunit 
Protein accessionYP_003143511 
Protein GI257063839 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID[TIGR02951] DMSO reductase, iron-sulfur subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCTA CACAATACGG CATGGTCATC GACCTTCGCA GCTGCACCGG GTGCCAGACC 
TGCGTTATCA GCTGCAAAAC CTCGAACGAA GTGCCGGGCG AGGGCCTGTG GGCACATGTG
GAGAACTATT ACGGCGGGCC TCTGTACATG GCCGCCGAGG TTGACGGCAA GGTGGCCATG
CATTTCCGCC CGCTGCTGTG CAACCACTGC GAGAGCCCGG CGTGCGTGCT GAACTGCCCC
ACGGGCGCCA TGCACAAAGA CGAGGAGACC GGCGTTGTTT CCGTGGACCA GAACATCTGC
ATCGGATGCA GCACGTGCGC CAACACCTGT CCGTACGGCG CGCCGGCATT GAACGAAGAC
CTCATGGTCA TGGGCAAATG CAATCTGTGC TCGGGCCGCG TGGACGAGGG CAAGCTCCCG
TTCTGCGTGC AGGCGTGCCC GGCGCGCGTC CGCTACTTCG GCGACATCTC CGACCCGAAC
AGCGATGTGT CGAAGCTGAT TGCGGAAAAC GGTGCGCAGC AGTACCTGCC CGAGAACGGC
ACGAACCCGT CGGTGTACTA CATTCTGCCT GAATAA
 
Protein sequence
MSATQYGMVI DLRSCTGCQT CVISCKTSNE VPGEGLWAHV ENYYGGPLYM AAEVDGKVAM 
HFRPLLCNHC ESPACVLNCP TGAMHKDEET GVVSVDQNIC IGCSTCANTC PYGAPALNED
LMVMGKCNLC SGRVDEGKLP FCVQACPARV RYFGDISDPN SDVSKLIAEN GAQQYLPENG
TNPSVYYILP E